Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3176 |
Symbol | |
ID | 4690636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3538502 |
End bp | 3538993 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850938 |
Product | nuclear protein SET |
Protein accession | YP_997924 |
Protein GI | 121610117 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.790185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATGGCA AGGGCGTTTT TGCCGTGCAA GACATCGCCG CAGGCCACGT GCTGCTGGAG TACACCGGCC AGGTCATCGA TTGGCAGCAG GCGCAGCAGC GCCACCCGCA TGACCCCATG CAACCCCGGC ACACCTTTTA TTTTCACGTC GATGACGAGC ATGTGATCGA CGCCAAGTTC GGCGGCAACT CCTCGCGCTG GATCAACCAC AGTTGCCATC CGAACTGCTA TGCCGACGAG CGCGAGGGCC GCATTTTCAT CACGGCGCTG CGCAATATCA AGGCCGGCGA AGAACTCAGT TACGACTACG GCCTGACCGT CGAGGAGCGC TACACCCCCC GGCTCAAGGC CGAGTACCCC TGCTGGTGCG GCAGCCCGAA CTGCCGTGGC ACCCTGCTGG CCCCCAAGCG CGGCTGGGCG CCACCACTGC CGCCGCCCGC CGCCACGGCC CCGGGCCCTG CCGAGCCACC CCAACGAGGC CGCAACCGGT GA
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Protein sequence | MHGKGVFAVQ DIAAGHVLLE YTGQVIDWQQ AQQRHPHDPM QPRHTFYFHV DDEHVIDAKF GGNSSRWINH SCHPNCYADE REGRIFITAL RNIKAGEELS YDYGLTVEER YTPRLKAEYP CWCGSPNCRG TLLAPKRGWA PPLPPPAATA PGPAEPPQRG RNR
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