Gene Veis_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3176 
Symbol 
ID4690636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3538502 
End bp3538993 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID639850938 
Productnuclear protein SET 
Protein accessionYP_997924 
Protein GI121610117 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.790185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGGCA AGGGCGTTTT TGCCGTGCAA GACATCGCCG CAGGCCACGT GCTGCTGGAG 
TACACCGGCC AGGTCATCGA TTGGCAGCAG GCGCAGCAGC GCCACCCGCA TGACCCCATG
CAACCCCGGC ACACCTTTTA TTTTCACGTC GATGACGAGC ATGTGATCGA CGCCAAGTTC
GGCGGCAACT CCTCGCGCTG GATCAACCAC AGTTGCCATC CGAACTGCTA TGCCGACGAG
CGCGAGGGCC GCATTTTCAT CACGGCGCTG CGCAATATCA AGGCCGGCGA AGAACTCAGT
TACGACTACG GCCTGACCGT CGAGGAGCGC TACACCCCCC GGCTCAAGGC CGAGTACCCC
TGCTGGTGCG GCAGCCCGAA CTGCCGTGGC ACCCTGCTGG CCCCCAAGCG CGGCTGGGCG
CCACCACTGC CGCCGCCCGC CGCCACGGCC CCGGGCCCTG CCGAGCCACC CCAACGAGGC
CGCAACCGGT GA
 
Protein sequence
MHGKGVFAVQ DIAAGHVLLE YTGQVIDWQQ AQQRHPHDPM QPRHTFYFHV DDEHVIDAKF 
GGNSSRWINH SCHPNCYADE REGRIFITAL RNIKAGEELS YDYGLTVEER YTPRLKAEYP
CWCGSPNCRG TLLAPKRGWA PPLPPPAATA PGPAEPPQRG RNR