Gene Veis_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2971 
Symbol 
ID4694913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3320748 
End bp3321653 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content66% 
IMG OID639850730 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_997723 
Protein GI121609916 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA AGCAAACCTT TGGCTTTATC GGCCTCGGCA ATATGGGCGG CCCCATGGTC 
AAGCGCCTTT TGCACGCGGG CCACACGGTG CTGGTGTTCG ATCGCGACGC GGCAGCCCTC
GCGCGTGCCG TGGCCGACGG CGCGCAGGCG CGATCGAGCG CACTCGACGT TGCCGACGCG
GCAGCGACCA TCTTCCTGAG TCTGCCGGAC GGCCCGGCCG TGCAGCATGT CATCTCGGCG
CAAGACGGCC TGCTGCAAGG CAAGCGCGTC AAGTGCGTGG TCGACCTGTC CACCATCGGG
CCACGCGCGG CAGTGGCTGC AAGCCAGGCG CTTGGCGCGC GCGGCATCGC TTATGTGGAT
TCGCCTGTCA GCGGCGGCAT CGGCGGTGCG GAGCGCGGCA CCCTGGCCGT GATGACCGCC
TGCCCGCAGC CGTTGTACGA CGAGCTTGCT CCGGTGCTGA AGAACTTCGG CCGGCTGTTC
TACATGGGCG CTGGCCCAGG TCTGGGTCAG ACCATGAAGT TGGCCAACAA CCTGCTTTCT
GCTGCGGCGG TGGCCATCAC GTCGGAGGCG ATGGCCATGG GTGCCAAGGC CGGCCTGGAT
CCGGGCGTGA TGCTGGAGGT GATCAATGCC GGCTCCGGGC GAAATTCGGC AACCATGGAG
AAATTTCCGA AGGCGGTGCT GACCGGCACC TTCAACATCG GCTTTGCTGC GCGGCTTGCC
TGCAAGGATG TGCGGCTGTG CCTCGAAGAG TCCGAGGCAC TGGGCGTGCC GATGGTGGTC
GGCGCGGCTG TGCGCGAGAT GCTGGTCGTC ACCAACGCGG TCTATGGCAA GGATGCGGAC
TATACGGATG TGGCGCGTCT GCTGGAGACA TGGGGCGGCG TGCCGATTCG CCAACATGTG
AAGTGA
 
Protein sequence
MMSKQTFGFI GLGNMGGPMV KRLLHAGHTV LVFDRDAAAL ARAVADGAQA RSSALDVADA 
AATIFLSLPD GPAVQHVISA QDGLLQGKRV KCVVDLSTIG PRAAVAASQA LGARGIAYVD
SPVSGGIGGA ERGTLAVMTA CPQPLYDELA PVLKNFGRLF YMGAGPGLGQ TMKLANNLLS
AAAVAITSEA MAMGAKAGLD PGVMLEVINA GSGRNSATME KFPKAVLTGT FNIGFAARLA
CKDVRLCLEE SEALGVPMVV GAAVREMLVV TNAVYGKDAD YTDVARLLET WGGVPIRQHV
K