| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2729 |
|---|
| Symbol | |
|---|
| ID | 4693026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3074618 |
|---|
| End bp | 3075514 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639850494 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_997489 |
|---|
| Protein GI | 121609682 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.256061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCT ACATCAACCA GGACACCAAA GTCATCACCC AGGGCATCAC GGGCAAGACC
GGCCAGTTCC ACACCGAAAA ATGCCAGGCA TACGCGAACG GCAAGAGCGC CTTCGTCGCC
GGCGTGAACC CCCGCAAGGC CGGCGAATCG ATCTTCGGCA TACCGATCTA CGCCAGCGTC
GGCGAAGCCG CAACCCAGAC CGGCGCCACC GTATCGGTGA TCTACGTGCC CCCTGCCGCC
GCCGCCGCCG CCATCTGGGA AGCCGTCGAA GCCGACCTGG ACCTGGCGAT CTGCATCACC
GAGGGCATCC CCGTGCGCGA CATGCTCGAA GTGCGCAACC GGATGCGGGC CAAGGAAGCG
GCCGGCGGCA AAAAGACCCT GCTGCTAGGC CCGAACTGCC CGGGCCTGAT CACGCCCGAG
GAGATCAAGA TCGGCATCAT GCCCGGCCAC ATCCACCGCA AGGGCCGCAT CGGTGTGGTC
AGCCGCTCCG GCACGCTGAC CTACGAAGCC GTGGCCATGC TGACCGAAGT GGGCCTGGGC
CAATCAACGG CCGTGGGCAT TGGCGGCGAC CCCATCAACG GCCTCAAGCA CATCGACGTG
ATGCAGGCAT TCAACGACGA CCCGGGCACC GACGCGGTGG TCATGATCGG CGAAATCGGC
GGCCCCGACG AGGCCATTGC CGCCCGCTGG TGCAAGACCC ACATGACAAA GCCCGTGGTC
GGCTTCATCG CCGGCGTCAC CGCCCCCCCC GGCAAACGCA TGGGCCACGC CGGCGCGCTG
ATCTCCGACG GCGCCGATAC GGCTGAAGCC AAGCTGGCCA TCATGCAAGA GTCGGGCTTC
GTGGTCACGC GCAACCCTTC GGAACTGGGG CGGCTGCTCA AGGCGCAGTT GAAATAA
|
|---|
| Protein sequence | MSIYINQDTK VITQGITGKT GQFHTEKCQA YANGKSAFVA GVNPRKAGES IFGIPIYASV
GEAATQTGAT VSVIYVPPAA AAAAIWEAVE ADLDLAICIT EGIPVRDMLE VRNRMRAKEA
AGGKKTLLLG PNCPGLITPE EIKIGIMPGH IHRKGRIGVV SRSGTLTYEA VAMLTEVGLG
QSTAVGIGGD PINGLKHIDV MQAFNDDPGT DAVVMIGEIG GPDEAIAARW CKTHMTKPVV
GFIAGVTAPP GKRMGHAGAL ISDGADTAEA KLAIMQESGF VVTRNPSELG RLLKAQLK
|
|---|
| |