Gene Veis_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2675 
Symbol 
ID4692676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3017177 
End bp3018430 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content71% 
IMG OID639850438 
Producthypothetical protein 
Protein accessionYP_997435 
Protein GI121609628 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CGCTGCTGCG CCCGCCGCGC AAGAACCCGC TGCTGCGCAC CCGGCAGATG 
AACCTGCCGC CCGGCGCGCG CAGCCGCGTG GCGCTCGGCC TGACGGCCGC CGCCGCCGAA
GGTCATTTCC GGTTGCAGAC CTGCGACGAC TGCGGCACGG TGCAGTACCC GCCGCGCGAG
GTCTGCCACC AGTGCCTGTC GGCCGCCCTG CGCTGGCGCC CGCAAAGCGG CGCCGGCACA
CTGCTCGGCA GCACCACGCT GCACCACAGC AACGAGCTGT TCTTTCGCGA GCGGCTGCCC
TGGCGGCTGG GCCTGGTGCA GCTCGATGCC GGGCCGACGC TCATGGTCCA CCTGCACGGT
GAGGTCGGCG ACGCGCCGCA GCGCGTGCGC GTCGGCGCCC GGCTCGACCG CGCGGGGCAG
GCCGTCCTGA TTGGTTTTCC GAATGCAGAA AGTGCCCCCA TGGCCGACGA CGAGATGCTG
CGTGAAATGA CCAGCGACCC CCAATTCCGC AAAGCGCTGG TGACCGACGG CAAGACCGGC
ACCGGCCAGG CCATCGTGCG CGCACTGGCG CAGGCCGGCG CCGACATCAT CTGGGTCGGC
CATGCCGAGC CTTGGAAAAA AACCGGCACC GGGCTCGACG AGATCGCGGC GCTGCCGCAG
GTCACACTCG TGCCGCTGGA CCTGACCGAC GGCCGCCAGG TGGCCGAGCT TGCCGGGGCC
ATCGGCGGCA AGGTCGACAT CGTGATCAAC AACGCCGAAC TGCATCGCAC CTTTGGCATC
GGCGCGCGGC GCGGCACCGA TGTGGCCAAG GCCGAGATGG AGATCAACTA CTTCGGCCTG
CTGCGCCTGG CGCAGGAGTT CGGCCCGGCG CTCAAGGGCC GCTCGGCCGA CGGCGTGGCG
GGCGCGACCG CGTGGGTCAA CCTGCTGTCG ATCTACGCGC TCAGCAACTT TCCGCCGCAC
GGCACCTTCA GCGCCTCGAA GGCCGCAGCG CACTCGCTCG CGCAGTGCCT GCGCGCGGAG
ATGCGGCCGG CCGGCATCCG CGTGATCAAC ATCTTCCCGG GGCCTATCGA CGACGAATGG
AACCAGCACC TGCCGCCGCC CAAGCTCGCC CCCGGCGCGC TGGCCCATGC CATCGTCAAG
GCACTGCGCG ATGGCGTGGA AGATGTCTAC CCCGGCGACG TGGCGCAAGA GTGGCTCGAG
CGCTGGCGCG ACAACCCCAA GGTGCTCGAG CGCGAACTCG CCGCCGGCGG CTGA
 
Protein sequence
MTTPLLRPPR KNPLLRTRQM NLPPGARSRV ALGLTAAAAE GHFRLQTCDD CGTVQYPPRE 
VCHQCLSAAL RWRPQSGAGT LLGSTTLHHS NELFFRERLP WRLGLVQLDA GPTLMVHLHG
EVGDAPQRVR VGARLDRAGQ AVLIGFPNAE SAPMADDEML REMTSDPQFR KALVTDGKTG
TGQAIVRALA QAGADIIWVG HAEPWKKTGT GLDEIAALPQ VTLVPLDLTD GRQVAELAGA
IGGKVDIVIN NAELHRTFGI GARRGTDVAK AEMEINYFGL LRLAQEFGPA LKGRSADGVA
GATAWVNLLS IYALSNFPPH GTFSASKAAA HSLAQCLRAE MRPAGIRVIN IFPGPIDDEW
NQHLPPPKLA PGALAHAIVK ALRDGVEDVY PGDVAQEWLE RWRDNPKVLE RELAAGG