Gene Veis_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2470 
Symbol 
ID4693355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2803652 
End bp2804548 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content66% 
IMG OID639850236 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997233 
Protein GI121609426 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGC GCCCATCGCG CCCCGCCGGT TTCTGGCCCC TGGCCATGGT CTTTGGCCTG 
TTCGTGCTGT TCATGTACGG GCCGATGCTG GTGATCTTCA TGCTGAGCCT GCAAGGCCCC
GAGGGCGGGC TGACTTTCCC GATGCGCGGC CTGTCGCTGC ACTGGTTTTA CCAACTGGCC
GAAGGGCTGG GCGTGGTCGA CATCGCGGCG GCGCTGTGGC GCTCGCTGGC CCTGGGTGCC
GTGGTGATGC TGTGCACCGT GCTGCTGTCG GTGCTGGCCG GGCTGGCGTT TCGCAAGCGG
CTGGCGGGCG GCGCTGTGCT GCTTTTCATC GCCGTGGCCA GCCTGATCAT GCCGTCAATC
ATCGTGTCGC TGGGCATAGG GCTGGAGTTC CGGCTGATCG ACAGCGGCAT TCAGTCTGCG
CTGCAATGGC TGGGCATGGA AAGCGCGCGG CAAAACTATG GCACGGCGCT CGGACTGTTC
AGTTCGGCAC TGGGCGCGCA CCTGACCTGG ACGCTGCCAT TCGGCCTGCT GATCATGTTT
GCCGTGTTCA ACCGCTTCAA CCCGGCCTAC GAAGAAGCCG CGCGCGACCT GGGCGCGACA
CCCTGGCAGG GCTTCGCGCA TGTGGTGCTG CCGCTGATCG CGCCTTCGGT GGTGGGCATC
GCCATGTTCG GCTTCACGCT CAGTTGGGAC GAGATCGCCC GCACCTCGCA GGCCATCGGC
GAGGTGAACA CGCTGCCGCT GGAGTTGCAG GGCCTGACCA GCACGGTGAC CACGCCCGCG
ATCTACGCGC TGGGCACGCT GACCACGGTG GTGTCGCTGC TGGTGATGGG CATCACGCTG
GCGCTGGTCT GGCTGCTCGA GCGCAGGCGC AAGGCACGCA CCAGAGCATC CCGATGA
 
Protein sequence
MSARPSRPAG FWPLAMVFGL FVLFMYGPML VIFMLSLQGP EGGLTFPMRG LSLHWFYQLA 
EGLGVVDIAA ALWRSLALGA VVMLCTVLLS VLAGLAFRKR LAGGAVLLFI AVASLIMPSI
IVSLGIGLEF RLIDSGIQSA LQWLGMESAR QNYGTALGLF SSALGAHLTW TLPFGLLIMF
AVFNRFNPAY EEAARDLGAT PWQGFAHVVL PLIAPSVVGI AMFGFTLSWD EIARTSQAIG
EVNTLPLELQ GLTSTVTTPA IYALGTLTTV VSLLVMGITL ALVWLLERRR KARTRASR