| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2424 |
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| Symbol | |
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| ID | 4692080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2740582 |
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| End bp | 2743632 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639850191 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_997188 |
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| Protein GI | 121609381 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.831432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG ACCGCAAACC TTTCCGCTAT GAGCCGATTG CGCTATCCAA CGAGAGCACG
GTTGTCGCCG AATTTCAGCC CGATGCGCCG AGCGTGCGCG AGGCCACCTA TCAAAGCGAA
GCCGCGTTGG AAAAGGCCTT CATCCAGCAA CTTCAACTGC AGGCGTATGA CTACCTGACC
ATCACCTCGG AAGTCGATCT GCTGGCCAAT CTGCGTCGCC AACTGGAAAA GCTCAACAAA
ATCAGCTTTT CCGATGCCGA GTGGGAGCGA TTTTTCACCA CCAGCATTGC CGGTGCCAAC
GACGGCTTCC TCGAAAAAAC CGCCCGCATT CAAGAAGATC ACATTCAAGT CTTGAAGCGC
GACGACGGCA CCACCAAGAA CGTCTACCTG ATCGACAAGG CCAACATCCA CAACAACGCC
TTGCAGGTGA TCAACCAATA CGAAACGCCT GTGGGTGAAA ACGCGGGGGC GCGTGCGACC
TGCTTCGATG TGACCGTGCT GGTCAACGGC CTGCCGATGG TGCAGGTCGA ATTGAAGCGC
CGAGGCGTGG ATATTCGCGA GGCATTCAAT CAGATCAACC GCTACCAGCG CGACAGCTTC
TGGGCAGGCT CGGGCCTGTT CGAGTATGTG CAGCTCTTCG TCATCAGCAA TGGCACGCTG
ACCAAGTACT ACAGCAACAC CGTGCGCTAC GGGCATTTGA ACGAGCAACC CGCCCGGCGT
GGAAAAGGCG GCAGCAAGAG CAAGACCTCC AACAGCTTTT CCTTCACCAG CTGGTGGGCC
GACGCGAAAA ACCAGCCTAT CACCGAGCTG ATCGGTTTCA CCAAGACCTT CTTTGCAAAA
CATTCGCTGC TGAACGTCCT CACCAAATAC TGCGTGTTCG ATGTGGATCG CAAGCTGCTG
GTGATGCGGC CCTACCAGAT CGTGGCCGCC GAGCGCATCC TGCAACGCAT TGCCACCGCC
ACCAATCACA AACAGTTGGG TACCGTAGCG GCGGGCGGCT ACATCTGGCA CACCACCGGC
TCTGGCAAAA CGCTGACCAG CTTCAAGGCG GCGCAGCTAG CCCGAGGCTT GCCGAATATC
GACAAGGTGC TGTTCGTGGT GGATCGCAAG GATCTGGACT ACCAGACCAT GCGCGAGTAC
GAACGCTTCG AGAAAGGCGC GGCCAACTCG AACACGTCCA CTGCGGTGCT GCAACGGCAA
TTGGAAGACC CGAACGCGCG CATCATCATC ACCACTATTC AGAAGCTTTC CCGCTTCGTC
ACCAAGAACA AGAAGCACCC GGTGTATGAG GCGCATGTGG TGGTGATCTT CGACGAATGC
CACCGCAGCC AGTTTGGCGA CATGCACGCC GAAATCACCC GGGTGTTCCA GCGCTATCAC
CTGTTTGGCT TTACCGGCAC GCCCATCTTT GCCGAGAACT CCGGCACCAC CGGCGGCCCG
CTGCGGTGTA CCACTGCGCA GGTCTTTGGC GACAAACTGC ACACCTACAC CATCGTCGAT
GCCATCAACG ACAAAAACGT GCTGCCGTTT CGCATCGACT ACATCAACAC GATCAAGACG
CAAGCGACTA TCCGCGACAA AAAGGTGTCA GCCATCGACA CCGAGCGGGC GCTGTTGGCA
CCGGAGCGCA TCACGCAGAT CGTGGACTAC ATCCGCGAGC ACTTCGATCA GAAGACCAAG
CGCGCCAGCC GCTACTGTCA CGACGGCAAG CGCCTCGCAG GCTTCAATTC GCTGTTCGCC
TGCGCCTCCA TCGACGCCGC AAAACGCTAC TATGCGAAGT TCGCCGAGCA GAAAAAGACG
ATACCCGAGG CGCAGCGGCT CAAGGTCGGC CTGATATACA GCTTTGCCGC CAACGAGGAG
GAATCCGATG GCATCTTGGG CGAGGAGGAG TTTGAAACCG AGGGACTGGA TGCCAGCTCC
CGCGATTTTC TGGATGCCGC CATCCAGGAC TACAACGCGC TGTTCGGCAC CAGCTTCGAC
ACCAGCGCCG ACAAGTTCCA GAACTACTAC AAGGACTTGT CGCAGCGCCT GAAAAAGCGT
GAGCTGGATT TGGTGATCGT GGTCAACATG TTCTTGACCG GCTTCGATGC CACCACGCTC
AATACCCTGT GGGCGGACAA GAACCTCAAG GCGCACGGCT TGATTCAGGC GTACTCGCGC
ACCAACCGTA TCCTCAACTC GGTCAAGACC TACGGCAACA TCGTCTCTTT CCGCAATCTG
GAGCAAGAAA CCAACGACGC GCTCGCCCTG TTCGGCAACA AGGACGCCAA GGGCATCGTG
CTGCTGAAGC CTTACGCCGA GTACTACAAG GAGTACGAGA AGCGGGTCGG GGATCTGGTG
GCCGGATTTC CGCTCGGCAA GTCCATCGTC GGCGAGGCGG CACAGAAGGC GTTCATCAAG
CTGTTCGGGT CGATCTTGCG GCTGAAGAAC ATCCTGACGG CCTTCGACGA TTTCTCAGGC
CATGAAATCC TCTCCGAGCG CGAGTTTCAG GATTACCAGA GCCTGTACCT GAACCTGTAC
GCCGAATTCC GCAGCACGTC GGAAGCGGAG AAGGAATCGA TCAACGACGA TGTGGTGTTC
GAGATCGAAC TCATCAAGCA GGTCGAAATC AACGTCGATT ACATCCTGCT GTTGGTCGAA
CAGTACCTGA AGAAGAAAGG CACGGGCGAC GACAAGGAAA TCCGAGCCAC CATAGAGCGC
GCCATCAATT CGAGCCCCAG CCTGCGCAAC AAGAAGGACT TGATCGAGTC TTTCGTGGAT
TCGGTGACTA CCAAGACCAA GGTGGACGCG CAATGGCAGT CCTTTGTGGC GACGAAAAAG
ACCGAGGAGC TGGAACGCAT CATCTCGGAA GAAAACCTCA ACGCCGAAGC CACGCGCACC
TTCATCGACA ACGCCTTCCG CGATGGCAGC ATCGCAGCCA CCGGCACCGC CGTCACCAAA
ATCCTGCCGC CTGTGTCGAG GTTCTCCAAG AGCAATGGCC ATGCGACCAA AAAGCAAACG
GTGCTGGACA AACTCGCCGC GTTCTTCGAG CGTTATTTTG GGATGGCCTG A
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| Protein sequence | MSEDRKPFRY EPIALSNEST VVAEFQPDAP SVREATYQSE AALEKAFIQQ LQLQAYDYLT
ITSEVDLLAN LRRQLEKLNK ISFSDAEWER FFTTSIAGAN DGFLEKTARI QEDHIQVLKR
DDGTTKNVYL IDKANIHNNA LQVINQYETP VGENAGARAT CFDVTVLVNG LPMVQVELKR
RGVDIREAFN QINRYQRDSF WAGSGLFEYV QLFVISNGTL TKYYSNTVRY GHLNEQPARR
GKGGSKSKTS NSFSFTSWWA DAKNQPITEL IGFTKTFFAK HSLLNVLTKY CVFDVDRKLL
VMRPYQIVAA ERILQRIATA TNHKQLGTVA AGGYIWHTTG SGKTLTSFKA AQLARGLPNI
DKVLFVVDRK DLDYQTMREY ERFEKGAANS NTSTAVLQRQ LEDPNARIII TTIQKLSRFV
TKNKKHPVYE AHVVVIFDEC HRSQFGDMHA EITRVFQRYH LFGFTGTPIF AENSGTTGGP
LRCTTAQVFG DKLHTYTIVD AINDKNVLPF RIDYINTIKT QATIRDKKVS AIDTERALLA
PERITQIVDY IREHFDQKTK RASRYCHDGK RLAGFNSLFA CASIDAAKRY YAKFAEQKKT
IPEAQRLKVG LIYSFAANEE ESDGILGEEE FETEGLDASS RDFLDAAIQD YNALFGTSFD
TSADKFQNYY KDLSQRLKKR ELDLVIVVNM FLTGFDATTL NTLWADKNLK AHGLIQAYSR
TNRILNSVKT YGNIVSFRNL EQETNDALAL FGNKDAKGIV LLKPYAEYYK EYEKRVGDLV
AGFPLGKSIV GEAAQKAFIK LFGSILRLKN ILTAFDDFSG HEILSEREFQ DYQSLYLNLY
AEFRSTSEAE KESINDDVVF EIELIKQVEI NVDYILLLVE QYLKKKGTGD DKEIRATIER
AINSSPSLRN KKDLIESFVD SVTTKTKVDA QWQSFVATKK TEELERIISE ENLNAEATRT
FIDNAFRDGS IAATGTAVTK ILPPVSRFSK SNGHATKKQT VLDKLAAFFE RYFGMA
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