| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2396 |
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| Symbol | gltD |
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| ID | 4691724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2713987 |
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| End bp | 2715465 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639850163 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_997160 |
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| Protein GI | 121609353 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA CCACCGGCTT CATGGAACAC GGGCGCATCG AAGAAGGCCA CCAGAGCGTT
GCCGAGCGAC TCAGGCATTA CAAGGAATTC GTCATCGGCC TCGACGAGGA CCAGGCCCGG
GTGCAGGGCG CGCGCTGCAT GGACTGCGGC ACGCCGTTTT GCAGCCATGG CTGCCCGGTG
AACAACATCA TTCCCGACTT CAACGACCTG ATCTACCAGG CCGACTGGAA GGGCGCGCTC
GAAGTACTGC ACAGCACCAA CAACTTCCCC GAGTTCACCG GCCGCATTTG CCCCGCGCCC
TGCGAGGCCG CCTGCGTGCT GAACGTGAAC GACAAGGCCG TGGGCATCAA GTCGATCGAG
CACGCGATCA TCGACCGCGC CTGGCAACAG GGCTGGGTGC AGCCCCGCCC GGCCCGGCAC
CCCAGCGGCA AGAAGGTGGC CGTGGTCGGC TCCGGCCCGG CCGGCATGGC CGCAGCGCAG
CAACTGGCGC GCGCCGGCCA CGGCGTCACG CTGTTCGAGA AGAATGACCG CGTGGGCGGT
CTGCTGCGCT ACGGCATCCC GGACTTCAAG ATGGAAAAAT CGCACATCGA CCGGCGCATC
GCGCAGCTAC AGGCCGAAGG CGTGGTCTTG CGCCCGGGGG TGTTCGTGGG CTCGGCCAGC
GAGGGCCTGG GCAAAGGCTC CAAGGTCGGC AACGCAGCCA AGGAAACCGT GACGCCCGAG
CAGTTGTACG CGCAGTTCGA TGCCGTGCTG CTGACCGGCG GCGCCGAGCA GTCACGCGAC
CTGCCGGTGC CCGGCCGCGG GTTGGACGGC ATCCACTTCG CGATGGAATT CCTGCCCCAG
CAAAACAAGG TCAATGCCGG CGACAAGCTC AAGGGGCAGT TGCGCGCGGA CGGCAAGCAT
GTGATCGTGA TCGGCGGCGG CGACACCGGC AGCGACTGCG TGGGCACCAG CCGCCGCCAT
GGCGCTGCCA GCGTCACGCA GTTCGAGCTG CTGCCCCGGC CGCCAGAAGA AGAAAACCGC
CCGCTGACCT GGCCCTACTG GCCGATCAAG CTGCGCACCA GTTCCAGCCA CGAAGAGGGC
TGCGCGCGCG AGTTCGCCAT CGCCACCCGG GAGTTCGTCG GCGACAAAGG CCGTGTGACG
GGCCTGAAAA CCGTGCGCGT GCAGTTCAAG GACGGCAAAC TGGTCGAAAT CGCCGGCTCG
GAACAGACCC TCCCGGCCGA CCTGGTGCTG CTGGCCATGG GTTTCGTCGG CCCGGTGGCG
CCGGTGCTCG ACGCCTTTGG GGTGGAGCAG GATGCCCGTG GCAATGCCCG CGCCAGCACC
GAACCCGACG GCGGCTACGC CACCAACGTG CCCAAGGTCT TTGCCGCCGG CGACATGCGC
CGGGGCCAGT CGCTGGTCGT CTGGGCCATC CGCGAGGGCC GGCAGGCGGC CCATGCGGTC
GATCGGTTTC TGATGGGGCA TTCCGAATTG CCCCGCTGA
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| Protein sequence | MGKTTGFMEH GRIEEGHQSV AERLRHYKEF VIGLDEDQAR VQGARCMDCG TPFCSHGCPV
NNIIPDFNDL IYQADWKGAL EVLHSTNNFP EFTGRICPAP CEAACVLNVN DKAVGIKSIE
HAIIDRAWQQ GWVQPRPARH PSGKKVAVVG SGPAGMAAAQ QLARAGHGVT LFEKNDRVGG
LLRYGIPDFK MEKSHIDRRI AQLQAEGVVL RPGVFVGSAS EGLGKGSKVG NAAKETVTPE
QLYAQFDAVL LTGGAEQSRD LPVPGRGLDG IHFAMEFLPQ QNKVNAGDKL KGQLRADGKH
VIVIGGGDTG SDCVGTSRRH GAASVTQFEL LPRPPEEENR PLTWPYWPIK LRTSSSHEEG
CAREFAIATR EFVGDKGRVT GLKTVRVQFK DGKLVEIAGS EQTLPADLVL LAMGFVGPVA
PVLDAFGVEQ DARGNARAST EPDGGYATNV PKVFAAGDMR RGQSLVVWAI REGRQAAHAV
DRFLMGHSEL PR
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