Gene Veis_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2338 
Symbol 
ID4694785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2642799 
End bp2643308 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID639850105 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_997103 
Protein GI121609296 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.613317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGTC TGCTCAATGG TCTGTACGAC GGCGCCGCCG CGCTGGCGGC GCTTTTCATG 
GTGTGCCTGC TGGGCATGGT GCTGCTGTCC ATCATCAGCC GCCAGTTGCA ATTCCATGTG
CCGGGCACCG ACGCCTATGC CGGCTACCTG ATGGCCGCAA CCGGCTTTCT GGCGCTGGCG
CACACGCTCA AGCGCGGCGA GCATATCCGC GTCACGCTGC TGCTCCACGC GCTGCCGGGG
CGCATGCAAA GGGCATTCGA GCTCTGGGCG CTGGCCATTG CCACGCTGCT GGCGTTGCTG
TTCGCGCTGT ACAGTTGCAA ACTGGCTTGG CAATCGCATG TGTTCGCCGA CATCTCCACC
GGCAACGATG CCACGCCGCT GTGGATTCCC CATATGTCGA TGGCCCTGGG CAGCGTGATT
TTGGCCATCG CGTTTCTTGA CGAATTGGTG CTGGAAGTGA TGGGCAAGCG CGCGCCGGCG
CATCGCGATG CCGCACTGCA CAGCGAATGA
 
Protein sequence
MRRLLNGLYD GAAALAALFM VCLLGMVLLS IISRQLQFHV PGTDAYAGYL MAATGFLALA 
HTLKRGEHIR VTLLLHALPG RMQRAFELWA LAIATLLALL FALYSCKLAW QSHVFADIST
GNDATPLWIP HMSMALGSVI LAIAFLDELV LEVMGKRAPA HRDAALHSE