Gene Veis_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2279 
Symbol 
ID4692325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2584941 
End bp2585819 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID639850046 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997045 
Protein GI121609238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT CCTGGCCTTA CCTGTTGCTG CTGCCGGCAT TGCTGATCGT GGCGCTGGTG 
GTGTTGCTGC CGTTGGTCTT TTCACTGTAT TCGAGCTTTA CTGCATACCG ACTGACGCGG
CCGGACTCGA TCACCCGTTT CATCGGATTT GCGAATTATG TCCGCCTGTT TCAGGACATG
GATTTCTGGT GGGCCTTCGG GCGGACCATC CTGTTTTTGA CGATCGTCCT GAATGCGGAG
TTGTCGTTGG GCTTGGGGCT GGCATTGCTA TTGGAGCAGG TGACGCGCGG GCAACGCCTG
CTGCGGACGA TCCTGATGTT CCCGATGATG TTTTCGCCCA TTTTGGTCGG TTTTCAATTC
AAATTCATGT TCAACGACAA CATTGGCATC GTCAATTACA TTCTGCAGCA CGGCTTCGGG
ATGCAGGAGT CCGTGCCGTG GCTGGTGGAT GGCCGGCTGG CTTTGTTTGC GCTGGCCGTG
GCTGAAATCT GGAACTCTAC TTCCGTTTTT GCCATCCTGT TGTTGGCCGG TTTGATGTCC
ATGCCCTCGG ACCCGATCGA GGCGGCAAAG GTTGACGGGT GTAGCGCATG GCAGGCATTC
CGGCATGTCA CGCTGCCTTA TCTGATGCCT TTTGTCTGGA TCGCCATGAC GATCCGCTCG
CTGGAGGTGG GGCGGGCCTT TGACATTGTA AAAATAATGA CCAATGGAGG GCCTGGCGGA
CGCACGGAGC TGATCTGGAC GCTGATGGCC CGCACCGGTT ACGTGGATGG AAGAATGGGT
CTGGCAAATG CCATGGGATA TATCTCGATC ATTCTTTCCA TGGCGTTTAC GGTGCATTTC
TTTGCAAAGT TGTCGGCCGC ACGCCGGCAT GTGTATTGA
 
Protein sequence
MRRSWPYLLL LPALLIVALV VLLPLVFSLY SSFTAYRLTR PDSITRFIGF ANYVRLFQDM 
DFWWAFGRTI LFLTIVLNAE LSLGLGLALL LEQVTRGQRL LRTILMFPMM FSPILVGFQF
KFMFNDNIGI VNYILQHGFG MQESVPWLVD GRLALFALAV AEIWNSTSVF AILLLAGLMS
MPSDPIEAAK VDGCSAWQAF RHVTLPYLMP FVWIAMTIRS LEVGRAFDIV KIMTNGGPGG
RTELIWTLMA RTGYVDGRMG LANAMGYISI ILSMAFTVHF FAKLSAARRH VY