| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2264 |
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| Symbol | rpoB |
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| ID | 4691655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2563115 |
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| End bp | 2567227 |
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| Gene Length | 4113 bp |
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| Protein Length | 1370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639850031 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_997030 |
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| Protein GI | 121609223 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATT CCTTTACCGA GCGCAAGCGA ATCCGCAAAA GTTTCGGCAC CCGCGACAGC
GTGCTCGAAG TTCCTTATTT GCTGCAAATG CAAAAGGACG CCTATACCGC CTTCCTGCAA
GCGGACAAGG AGCCCCGCAA AAGAACCATC GAGGGTCTGC AGGCGGCATT CGATGCCGCC
TTTCCGATCG TCTCGCACAA CGGTTTCGTC GAGATGAAGT TCATCGAGTA CAACCTGGCC
AGGCCGGCAT TCGATGTGCG CGAGTGCCAG ACGCGCGGCC TGACCTTTGC GTCGGCCGTG
CGGGCCAAGG TGCAGTTGAT CATCTATGAC CGCGAGTCCT CGACCTCGCA GTCCAAGGTG
GTCAAGGAAG TCAAGGAGCA AGAGGTCTAC ATGGGCGAAG TGCCGCTGAT GACCGACAAG
GGCTCGTTCA TCATCAACGG CACCGAGCGC GTGATCGTCT CGCAGTTGCA CCGCTCGCCG
GGTGTGTTCT TCGAGCATGA CAAGGGCAAG ACCCATGGCT CGGGCAAGCT GCTGTTTTCC
GCGCGCATCA TTCCTTACCG TGGCTCTTGG CTCGACTTCG AGTTCGACCC CAAGGACATC
CTGTACTTTC GCGTCGACCG CCGGCGCAAG ATGCCGGTGA CGATCTTGCT CAAGGCCATC
GGCCTGAACC CGGAATCGAT CCTGGCGAAC TTCTTCGTCA ACGACAATTT CCGGCTGATG
GACAGCGGCG CGCAAATGGA ATTCGTCCCC GAGCGGCTGC GCGGCGAAGT GGCCCGTTTC
GACATCACCG ACAAGTCCGG CAAGCTCATC GTTGCCAAGG ACAAGCGCGT GACTGCGCGC
CACACCCGCG ATCTGGAGCA GTCCGGCAGC ACGCATATCA GCGTGCCCGA GGATTTCCTG
GTCGGCCGGG TCGTGGCGCG CACCATCGTC GATGCCGACA GCGGCGAAAT CCTGGCCAAG
GCCAATGACG AGTTGACCGA AGCCCTGCTC AAGAAGCTGC GCAGCGCCGC CGTGCGGGAG
TTGCAGTGCA TCTACACCAA CGAACTCGAC CAGGGCGCTT ACATCTCGCA CACCCTGCGC
AGCGACGAAA CGGTGGACGA GTTTGCCGCC CGCGTGGCCA TCTACCGCAT GATGCGCCCT
GGCGAGCCGC CCACCGAGGA CGCGGTGCAG GCCCTGTTCC AGCGCCTGTT CTACAACCCC
GATACCTACG ATTTGTCGCG TGTCGGCCGG ATGAAGTTCA ACGCCCGGAT CGGGCGCGAC
GAGTCCACCG GCCCGATGGT GCTGTCCAAT GAGGACATCC TGGCCGTGGT CAAGATTTTG
GTCGACCTGC GCAACGGCAA TGGCGAAGTC GATGACATCG ATCACCTGGG CAACCGCCGC
GTGCGCTGCG TCGGCGAGTT GGCGGAAAAC CAGTACCGCA CCGGCCTGGC GCGTATCGAG
AAAGCCGTCA AGGAGCGTCT GGGCCAGGCC GAGCAAGAGC CGCTGATGCC GCATGACCTG
ATCAACTCCA AGCCGATTTC GGCGGCCCTG AAGGAGTTTT TCGGCGCTTC GCAGTTGTCG
CAGTTCATGG ACCAGACCAA CCCGCTGGCA GAGATCACGC ACAAGCGCCG CGTCTCCGCG
CTGGGCCCGG GGGGGTTGAC CCGCGAGCGC GCAGGTTTTG AAGTGCGCGA CGTGCATGTG
ACCCACTATG GCCGCGTGTG CCCGATCGAA ACCCCCGAAG GCCCGAACAT CGGTTTGATC
AACTCGCTGG CACTGTACGC GCGCCTGAAC GAGTACGGCT TCATCGAAAC CCCGTACCGC
CGGGTGGTCG GCGGCATGGT CACCAACGAC ATCGACTACC TGTCGGCGAT CGAAGAAGGC
AAGTACGTGA TCGCGCAGGC CAACGCCGTG CTCGACAAGG AGGGGCGCCT GACGGGCGAC
TTGGTCTCGG CCCGTGAAAA AGGCGAGTCG ATCCTGTGCG CCGCCGACCG GGTGCGGTAC
ATGGATGTCT CGCCTGCGCA GATCGTGTCG GTGGCCGCTT CGCTGGTGCC GTTCCTGGAG
CACGACGATG CCAACCGCGC CTTGATGGGC GCCAACATGT CGCGCCAGGC CGTGCCGGTG
CTGCGCCCGG AAAAGCCGCT GGTCGGAACC GGCATCGAGC GCGTGGCGGC CATCGACTCG
GGCACCGTGG TCACGGCAAC ACGCGGCGGC AGCGTGGACT ATGTCGATGC CACCCGCATC
GTGGTGCGCG TCAATGACGA CGAAACGGTG GCTGGCGAAG TCGGGGTGGA CATCTACAAC
CTGATCAAGT ACCAGCGCTC CAACCAGAAC ACCAACATCC ACCAGCGCCC CATCGTCAAA
AAGGGCGACC GGCTGGTCAA GGGCGATGTG ATCGCCGATG GCGCATCGAC GGACCTGGGC
GAAATCGCCA TTGGCCAGAA CATGCTGATC GCGTTCATGC CCTGGAACGG CTACAACTTC
GAGGACTCGA TCCTGATCTC GGAACGGGTG GTGTCCGAAG ACCGCTACAC CTCGATCCAC
ATCGAGGAAC TGGTGGTGAT GGCCCGCGAT ACCAAGCTCG GCGCCGAAGA AATCACGCGC
GATATCCCGA ACCTGTCGGA GCAGCAACTG AACCGCCTCG ACGAGTCCGG CATCATCTAC
GTGGGCGCCG AAGTGCAGCC CGGCGATACG CTGGTGGGCA AGGTCACGCC CAAGGGCGAG
ACCACCCTCA CACCCGAAGA AAAGCTGCTG CGCGCGATCT TCGGCGAGAA GGCTTCCGAT
GTGAAGGACA CCTCGCTGCG CGTCGAGCAA GGCTCGCAAG GCACGGTGAT CGACGTGCAG
GTGTTCACCC GTGAAGGAAT AGCGCGCGAC AAGCGCGCGC AGCAGATCAT CGACGATGAG
CTCAAGCGCT TTCGGCTGGA CTTGAACGAT CAACTGCGCA TCGTCGAGGC CGACGCCTTC
GAGCGCATCG AAAAGCTGCT GCTCGGGCGC GTGGCCAATG GCGGTCCGCA CAAACTGCTC
AAGGGCGCGA AAATCGACAA GCCCTATCTG TCGTCGGTGG AGAAATTCCA TTGGTTCGAC
ATCCGCCCGG CGCAGGACGA GGTCGCCGCG CAGCTCGAAT TGATCAAGGA TGCGCTGGAG
CAGACGCGCC ACAGCTTCGA CCTGGCTTTC GAGGAAAAAA AGAAAAAACT CACGCAAGGC
GATGAGTTGC CCGCCGGCGT GCTGAAGATG GTCAAGGTCT ACCTGGCCGT CAAGCGCCGC
CTGCAACCTG GCGACAAGAT GGCCGGGCGC CATGGCAACA AGGGGGTGGT CTCGAAGATC
GTTCCGGTCG AAGACATGCC TTACATGGCC GACGGCACGC CTGCCGACAT CGTGCTCAAC
CCGCTGGGCG TGCCTTCGCG GATGAACATC GGCCAGGTGC TGGAAGTGCA CCTGGGCTGG
GCCAGCAAGG GCATAGGCCA GCGCATCGGC GACATGTTGC AGCAGCAGGC CAAGGCCGCA
GAACTGCGCA AGTTTCTGGA CAAGGTGTAC AACGCGCGCG GCCGCACCGA GGACCTGGCG
CAACTGTGCG ACGAGGAACT CGTGGCCATG GCGGCCCATC TCAGGCATGG CATGCCGTAT
GCCACCCCGG TGTTCGACGG TGCTTCGGAA GAAGAAATCA AGGACATGCT CAAAATCGCT
TACCCGGACG AGATCGCGCA GCGCAAGGGT CTGACCGCCA CCCGCACCCA AGCCTTCCTG
TACGACGGCC GCACCGGCGA GCGCTTCGAG CGGCCCACGA CCATAGGCTA CATGCACTAC
CTGAAGCTGC ACCACTTGGT CGATGACAAG ATGCACGCCC GTTCCACCGG CCCCTACTCG
CTGGTCACGC AGCAACCGCT GGGCGGCAAG GCCCAGTTCG GCGGCCAGCG CTTCGGCGAG
ATGGAAGTCT GGGCGCTCGA AGCCTACGGC GCCGCCTACG TGCTGCAGGA AATGCTCACC
GTCAAGTCCG ACGATGTGGC CGGCCGCACC AAGGTGTACG AGTCGATCGT CAAGGGCGAA
CATGCCATCG AAGCCGGCAT GCCGGAATCG TTCAACGTGT TGGTCAAGGA AATCCGTTCA
CTGGGCCTGG ACATCGAGCT CGAACGCTCT TGA
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| Protein sequence | MAYSFTERKR IRKSFGTRDS VLEVPYLLQM QKDAYTAFLQ ADKEPRKRTI EGLQAAFDAA
FPIVSHNGFV EMKFIEYNLA RPAFDVRECQ TRGLTFASAV RAKVQLIIYD RESSTSQSKV
VKEVKEQEVY MGEVPLMTDK GSFIINGTER VIVSQLHRSP GVFFEHDKGK THGSGKLLFS
ARIIPYRGSW LDFEFDPKDI LYFRVDRRRK MPVTILLKAI GLNPESILAN FFVNDNFRLM
DSGAQMEFVP ERLRGEVARF DITDKSGKLI VAKDKRVTAR HTRDLEQSGS THISVPEDFL
VGRVVARTIV DADSGEILAK ANDELTEALL KKLRSAAVRE LQCIYTNELD QGAYISHTLR
SDETVDEFAA RVAIYRMMRP GEPPTEDAVQ ALFQRLFYNP DTYDLSRVGR MKFNARIGRD
ESTGPMVLSN EDILAVVKIL VDLRNGNGEV DDIDHLGNRR VRCVGELAEN QYRTGLARIE
KAVKERLGQA EQEPLMPHDL INSKPISAAL KEFFGASQLS QFMDQTNPLA EITHKRRVSA
LGPGGLTRER AGFEVRDVHV THYGRVCPIE TPEGPNIGLI NSLALYARLN EYGFIETPYR
RVVGGMVTND IDYLSAIEEG KYVIAQANAV LDKEGRLTGD LVSAREKGES ILCAADRVRY
MDVSPAQIVS VAASLVPFLE HDDANRALMG ANMSRQAVPV LRPEKPLVGT GIERVAAIDS
GTVVTATRGG SVDYVDATRI VVRVNDDETV AGEVGVDIYN LIKYQRSNQN TNIHQRPIVK
KGDRLVKGDV IADGASTDLG EIAIGQNMLI AFMPWNGYNF EDSILISERV VSEDRYTSIH
IEELVVMARD TKLGAEEITR DIPNLSEQQL NRLDESGIIY VGAEVQPGDT LVGKVTPKGE
TTLTPEEKLL RAIFGEKASD VKDTSLRVEQ GSQGTVIDVQ VFTREGIARD KRAQQIIDDE
LKRFRLDLND QLRIVEADAF ERIEKLLLGR VANGGPHKLL KGAKIDKPYL SSVEKFHWFD
IRPAQDEVAA QLELIKDALE QTRHSFDLAF EEKKKKLTQG DELPAGVLKM VKVYLAVKRR
LQPGDKMAGR HGNKGVVSKI VPVEDMPYMA DGTPADIVLN PLGVPSRMNI GQVLEVHLGW
ASKGIGQRIG DMLQQQAKAA ELRKFLDKVY NARGRTEDLA QLCDEELVAM AAHLRHGMPY
ATPVFDGASE EEIKDMLKIA YPDEIAQRKG LTATRTQAFL YDGRTGERFE RPTTIGYMHY
LKLHHLVDDK MHARSTGPYS LVTQQPLGGK AQFGGQRFGE MEVWALEAYG AAYVLQEMLT
VKSDDVAGRT KVYESIVKGE HAIEAGMPES FNVLVKEIRS LGLDIELERS
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