| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2239 |
|---|
| Symbol | |
|---|
| ID | 4691748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2535764 |
|---|
| End bp | 2536738 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850001 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_997005 |
|---|
| Protein GI | 121609198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.547478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCT TGCTCGACAT CCGGGAACTC TCGCGCCACT ACCCGGTGCG CAACTCCCCA
TGGCCCTGGG GCAAATCGGT CAGCCTGCGC GCGGTCGACG GTGTTTCCCT GCGTTTGCCT
GCGGGCAAAA CCCTGGGTCT GGTGGGCGAA TCGGGTTGCG GAAAATCCAC CACTGCCCGC
ATGGTGCTCG GGCTCTTGCC GGCCAGCGGC GGACAGGTGC TTTTCGAGGG GCAACCGGTG
CCATCGGTGC GCGGCCCCCG CTGGCGGGCT TTGCGCCAGC GGATGCAAAT GGTCTACCAG
AACCCGCTGG ATGCACTCGA CCGCCGGCTG CGCGTGCAAG ACCAGGTGGC CGAGCCGCTG
ACGATTTTCC GGCAGGGTTC GATGGCCGAG CGCAACGAGC GCGCACGCGC AATGATGGCA
TCGGTGGGGC TGACGCCGCA CCTGATGACC CGCTATCCGC ATGAGCTTTC AGGCGGCCAG
CGCCAGCGCG TGGTGCTGGC ACGGGCATTG ATCCTCGGGC CGTCCTTGCT GGTCTGCGAT
GAGCCTGTCT CGGCGCTGGA CATGTCGATA CAGGCGCAGG TGATCAATCT GCTGCAAGAC
ATTCAGGAAC GGCGGCAGGT GGCCTACCTG TTCATCAGCC ACGACCTCAA GGTGGTGCGC
CAGGTAAGCC ATGAAGTGGC CGTGATGTAC CTGGGCCGCA TCGTCGAGCA AGGCGCCGCC
GAAGATTTGT TCCGCCGCCC GGCGCACCCT TACACGCAGG CCCTGGTGTC GGCCGTCCCG
TCGCCATGGC GCAGCGCGGG CTTGCCCCGC ATCGTGCTGC AAGGTGATCC GCCCCGCCCC
GGCGCGCTGT CTGCGGGATG CGCCTTCCAC AGCCGGTGCG CGCAGGCCAT GCCATCGTGC
CGGGTCGTGC GGCCCGAACT GCAACCCATC GCACCCGGCC GCACAGCCGC GTGCCACCTC
CTTGCGCGGG CTTGA
|
|---|
| Protein sequence | MSALLDIREL SRHYPVRNSP WPWGKSVSLR AVDGVSLRLP AGKTLGLVGE SGCGKSTTAR
MVLGLLPASG GQVLFEGQPV PSVRGPRWRA LRQRMQMVYQ NPLDALDRRL RVQDQVAEPL
TIFRQGSMAE RNERARAMMA SVGLTPHLMT RYPHELSGGQ RQRVVLARAL ILGPSLLVCD
EPVSALDMSI QAQVINLLQD IQERRQVAYL FISHDLKVVR QVSHEVAVMY LGRIVEQGAA
EDLFRRPAHP YTQALVSAVP SPWRSAGLPR IVLQGDPPRP GALSAGCAFH SRCAQAMPSC
RVVRPELQPI APGRTAACHL LARA
|
|---|
| |