| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2079 |
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| Symbol | |
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| ID | 4691361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 2363641 |
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| End bp | 2364633 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639849843 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_996847 |
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| Protein GI | 121609040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.509497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0138886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC AACGCCGCGC ATTCGCCATC AGCGCAGCCG CCAGCGCCGC GCTTGCCGCA
GCCGCCCTGG CCGCCAGTGC CGCCGCGATG GCCCAGACCG GGGCCTTCAA GATCGGCGTA
TCAATGAAAA CCTTGTCGGC GCCGTACTTC GCCGCGCAAA TGGAAGCGGC CAAGGCGCGC
GGCAAAGAGT TGGGCTACGA AGTGCTGGCC ACCGATGCCC AGGGCAAGCT GCAAAAACAA
ATCTCCGACG TGGAAGACCT GGTCACCCGG GGCGTCAAGC TGTTGATCAT CAACCCGGCC
GACTCCGAAG GCTTGGTCAA TGCCGTCAAC AACGCCAGCG CCAACGGCGT CAAGGTGGTC
GTCATCGACA GCACGCTGAA CCCCCGGGCC AACTTCGTCA CGCAAGTGCA GTCCTCCAAC
AGCATCAATG GCGCCTTGGT GGGCCACTGG GTCATCGAGG AAGTGGGCAA CAAGTCGCTG
AAGATTGCGC TGCTGTCGGG CGAAAAGGGC AACCCCGTGG GCCAGGAGCG TCGCCTGGGT
GTGCTCAGCG GAATCATCGA AGCGCAGTTG CGCAAGTTCG GCAAGGCCGA TCTGACCGTG
GTCGGTCAGG GCTGGGGCCA CTGGAATGAC GAAGGCGGCC TCAAGGCGAT GGAAGATTTG
CTGGTGGCCA ACAAGGACAT CAACATGGTC TTGGGCGAAA ACGACAGCAT GGTGCTGGGC
GCGCGCCGCG CCATCGAAAG CGCTGGCCGC ACCGGCATTT TGCTGGTCGC CGCAGCCGAC
GCGCAGAAAG AAGCCCTGGC CTTGATCAAG CAAGGCAAGT ATGGCGTCAC CGGTCTGAAT
GACCCGGCCC TGGTGGCACG CACGGCGATC GACCTGGGTG TGAAAGTGGT CAAGGGTGAA
GTCAAGGATG TGCCCAAGCA AACCCTGACC ACCCCGGCGG CCATCACCAA GGGCAATGTG
GACAAGTTCT ACAACCCCAA GGCAGTGTTC TGA
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| Protein sequence | MNIQRRAFAI SAAASAALAA AALAASAAAM AQTGAFKIGV SMKTLSAPYF AAQMEAAKAR
GKELGYEVLA TDAQGKLQKQ ISDVEDLVTR GVKLLIINPA DSEGLVNAVN NASANGVKVV
VIDSTLNPRA NFVTQVQSSN SINGALVGHW VIEEVGNKSL KIALLSGEKG NPVGQERRLG
VLSGIIEAQL RKFGKADLTV VGQGWGHWND EGGLKAMEDL LVANKDINMV LGENDSMVLG
ARRAIESAGR TGILLVAAAD AQKEALALIK QGKYGVTGLN DPALVARTAI DLGVKVVKGE
VKDVPKQTLT TPAAITKGNV DKFYNPKAVF
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