Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2046 |
Symbol | |
ID | 4693161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2322292 |
End bp | 2323761 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639849810 |
Product | ABC transporter related |
Protein accession | YP_996814 |
Protein GI | 121609007 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.470002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTCCACG CCCAGGGCAT CGCCAAGAGC TTCAACGGCG TTGCGGCCCT GCGCGACGGG CGTCTGGCGT TGCGGGCCGG TTCGGTGCAT GCGCTGTGCG GCGGCAACGG CGCGGGCAAG TCGACCTTTT TGAACATCCT GATGGGCTTG CTGCGCCGCG ACGCGGGCAC GCTGCAGGTG GACGGCGTTG CGGTCGATTT CGCCAGCCCG GCCGAGGCGC TGGCGGCCAG GATTTCCATC ATCACGCAGG AGCTTTCGCC GATTCCGGGC ATGACCGTGG CCGAGAACAT CTTTCTCGGC CGCGAGCCGC GCAAGGCCGG CGTCATGATC GACTACAAGC GGCTGTTCGC CGTGGCCGGC GCGCTGTTGC AGCGGCTGCG CTTTGGCATC GATCCGCGCG CGCCGATGCA CCGGCTGAGC CTGGCGCAGA CCCAATTGGT GGAGATCGCC AAAGCCTTCA GCCATGCCAG CCGCGTGCTG ATCATGGACG AGCCTACCTC GGCCATTGGC GAGCAGGAGG CGCAAACGCT GTTCCAGGCC ATCCGTGGGG TCACGGCCCA GGGCGCGGGC GTGATCTATG TCTCGCACCG GCTGTCGGAG ATTTTCGCCA TCGCCGACAG CTACACGGTG CTGCGCGACG GCGACTTCGT CGAAACCGGC AGGCTGGCCG ACATCGACCG GCGCCACCTC GTGCGCCAGA TCGTCGGGCG CGAGTTGCAC GCCAGCGCGC ACCAGCCAAC GGGCAGCAGC GCGCCGGCGC TGCTCTCGGT CCAGGGCCTG GGCCGCGCCG GCGAGTTCGA CGACATCAGT TTGCAGGTCG CGCCCGGCGA AGTGCTCGGC ATTTACGGGC TGATGGGTTC GGGTCGCAGC GAGTTTCTGC ACTGCGTCTA CGGCATCACC GCGCCCGACA GCGGTTCGGT TCGGCTCGAG GGCCGGATCC TGCCGGCCGG CCGGCCGCAC CAGGCCATCC GCCGGGGCCT GGCGCTGGTG ACCGAGGACC GCAAGGCCAC CGGCCTGGTG CTGACCGCGT CGGTGGCCGA CAACGTGAGC CTGGCGGCAT TGCCGGCGCT GACCCGCGCC GGCGTGGTGC GGCGCGGCCG CGAGCGCGCG CTGGTGGCCC GCATGGTGGA GCGCCTGCGC ATCAAACTGG CGACGCCGCG CATGGCCGTC TCGGGCCTGT CGGGGGGCAA CCAGCAAAAG GTGGTGCTGG CGCGCTGCCT GGCGACCGAT CCGCTGTGCC TGCTGTGCGA CGAGCCTACG CGCGGCATCG ATGAAGGCGC CAAACGCGAG GTCTATGCGC TGATCGGGCA GTTCACCGCC CAGGGTGGCG CGGCGATCGT GGTCTCGTCC GAAGCGCCCG AACTGCTGAC CCTGAGCGAC CGCATCGCCA TCTTCAATAA AGGCCGGCTG GCACAAGTCG TTGCGGTCGC AGACGCCACG CAAGAACAAT TGCTGCACCT GGCATCCTGA
|
Protein sequence | MLHAQGIAKS FNGVAALRDG RLALRAGSVH ALCGGNGAGK STFLNILMGL LRRDAGTLQV DGVAVDFASP AEALAARISI ITQELSPIPG MTVAENIFLG REPRKAGVMI DYKRLFAVAG ALLQRLRFGI DPRAPMHRLS LAQTQLVEIA KAFSHASRVL IMDEPTSAIG EQEAQTLFQA IRGVTAQGAG VIYVSHRLSE IFAIADSYTV LRDGDFVETG RLADIDRRHL VRQIVGRELH ASAHQPTGSS APALLSVQGL GRAGEFDDIS LQVAPGEVLG IYGLMGSGRS EFLHCVYGIT APDSGSVRLE GRILPAGRPH QAIRRGLALV TEDRKATGLV LTASVADNVS LAALPALTRA GVVRRGRERA LVARMVERLR IKLATPRMAV SGLSGGNQQK VVLARCLATD PLCLLCDEPT RGIDEGAKRE VYALIGQFTA QGGAAIVVSS EAPELLTLSD RIAIFNKGRL AQVVAVADAT QEQLLHLAS
|
| |