Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1982 |
Symbol | |
ID | 4693531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2253762 |
End bp | 2254592 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639849748 |
Product | extracellular solute-binding protein |
Protein accession | YP_996752 |
Protein GI | 121608945 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA ACACACTCAC CGGCATCGGC CTCCTGGCCG TGGCGCTCGG CCTGGCCGCG CCCGCAGCCC AGGCGCAAGG AATGCGCGCC AAGGGCGCGC CGATCCGGGC GGCCGTCGTG TCGAACTATC CCCCGCTCGA ATACAAGGAT CCGGCGAGCG GCAAACTGGT CGGCTTCGAC ATCGACCTGG GCGAAGCGCT CGCGGCGCGC CTGGGCAGCA CGATCAAATG GGAGGAAACC AGCTTCGACC AGATGATGAG CTCGCTCGCC ACCGGGCGCG TGGACATCAT CCTGTCCGGC ATGACCGACA TCCCGGCACG CCGCGATGCG GTGCGGTTCA TCGACTACCT GAAGACCGGG CCGCAGTTTT ATGTGCTCGG CGCCCGTGCC ACCGAGTTTG CCAGCACCGA GGCGCTGTGC GGCAAGAAGG TGGGCGCCAG CCGCCGCACA TCGTTTCTGG CCGAGATCGC CAAGTGGAGC GACGCGCACT GCGTGAAGGC CGGCAAGCCG GCCATCATCG TCGCCGGCAC CGACGGATCG GCGGACGCGC GCACGCAGTT GCGCCAAGGC CGTCTCGATG CCGCCGTGCA GGGCGGCGAA ACGCTGAACT ACATCTTCGG GCAGGAGCCG AACACCTATG CGCTGGTGGG CAAACCCTTC GCCTTCCAGT ACGTCGGTCT GGCGATCGGG CGCAAGGACG AAGCGCTATC GACAGAACTG GCCGGCGCGA TGGACCAACT GATCGCCGAT GGCTCGTATG CGAAGATCGC CGCCAAGTGG GGGCTGGCCG ATTACACGGT GTCGAAGCTG ATTCTCGACA GTGCCGACTG A
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Protein sequence | MARNTLTGIG LLAVALGLAA PAAQAQGMRA KGAPIRAAVV SNYPPLEYKD PASGKLVGFD IDLGEALAAR LGSTIKWEET SFDQMMSSLA TGRVDIILSG MTDIPARRDA VRFIDYLKTG PQFYVLGARA TEFASTEALC GKKVGASRRT SFLAEIAKWS DAHCVKAGKP AIIVAGTDGS ADARTQLRQG RLDAAVQGGE TLNYIFGQEP NTYALVGKPF AFQYVGLAIG RKDEALSTEL AGAMDQLIAD GSYAKIAAKW GLADYTVSKL ILDSAD
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