Gene Veis_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1895 
Symbol 
ID4691573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2121865 
End bp2124012 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content72% 
IMG OID639849662 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_996666 
Protein GI121608859 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.4347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CCCGCATCCG TGCAACTTGC GCAGCGGCTG ACACCGACGG ATGCGCCGGG 
GGTCTTGGCG CGCGGGCACG GCCCATGAAA AAACTGCTGG TCGCCAATCG CGGCGAGATC
GCCCGCCGGG TGATCCACAC CGCCCACGCG ATGGGCATTG CCACCGTGGC CGTTCATTCC
GACCCTGACG CGCAGGCCCT TCATGTGCGC GAGGCCACGC AGGCCGTCGC GCTGGGCGGC
GCGGCCAGCG CCGACAGCTA CCTGCGCGGC GACAAACTGC TGGCCGCAGC GCGCGCCACC
GGCGCCGATG CGCTGCACCC CGGCTACGGC TTTCTGAGCG AGAACGCCGA CTTTGCCCAG
GCCGTGCTGG ATGCGGGCCT GCTCTGGGTC GGCCCGCCGC CGGCGGCCAT TCGCGCACTG
GGCAACAAGG CGGCGGCCAA GGCGCTGGCG GCGGCGCACG CCGTGCCCTG TCTGCCGGGC
TATGCGGGCG CAGACCAAAG CCCGGAGCGC TTTGCCGCCG AGGCCCGGCG CACGGGCTAT
CCGCTGATGG TCAAGGCCGT CGCCGGCGGC GGCGGGCGGG GCCTGCGGCT GGTGACCGAT
GCCGCGCAGT TGCCCGCCGC GCTGGCCAGT GCGCGCTCGG AGGCGCTGGC CGGTTTTGGC
TGCGGCGATT TGCTGATCGA GCGCGCGCTG CTGCACCCGC GCCATCTGGA GGTGCAGGTC
TTTGCCGACG CGCATGGCGC CTGCATCCAC CTGGGCGAGC GCGACTGCTC GGTGCAGCGG
CGCCACCAGA AACTCATCGA AGAATCGCCC AGCCCGGCCG TCGATGCCGC GCTGCGCGAG
CGCCTGGGCG CTTGCGCCGT CGCATTGGCG CGCGCTGCGG GCTATGTGGG CGCGGGCACG
GTGGAGTTTT TGCTCGAGGA GGGGCAGTTT TTTCTGCTGG AGATGAACAC CCGCCTGCAG
GTGGAGCACC CGGTGACCGA AGCCCTCGCC GGGCTGGACC TGGTGGAGTG GCAGTTGCGC
GTGGCGCGCG GCGAGCCGCT GGCGCTGGCG CAGCACCAGG TGGCGCTGCA GGGCCATGCG
ATCGAAGTGC GGCTGTACGC CGAAGACGCG CAATTTCAGC CGCACACCGG GCGCGTGCTG
CACTGGAGCA CACCGCCGGC CACGCTGTTC GGGCGCGCCG CATCCGGCGC GCTGCGCATC
GACCATGCGC TGGAGCCAGG CAGCGACATC CCGCCCCACT ACGACGCGAT GCTCGGCAAA
CTGATCATGC ACGCGCCCAC ACGCGAGCAG GCCATTGCCG CGCTGGTGCG CGCGCTCGAT
GGCACCAGCG TGCTGGGCCT GCCGACCAAC CGCGCATTGC TTGCGGCCTG CCTGGATCAC
CCCCGGTTCC GCAGCGGACA GGCGCTGGTG TCGTTTCTGC GCGAACCGGA CGGGGCGCTG
CATGATTTGC GTCAGGCGCT ATTGAAAAAT GAGCTACAGG TCATCATTCC ATCTGCGCTA
TCGGCCATAT ATGCAGAAAA CGCTGCGGCA TCGGCCCTGC CTTGCGGCCT GGCCCGGCCG
CTGCAGTTGC GCCACCAGGG GCAGTTGCAC CGGCTGACCG TGCGCGAGTG CGGAGCCGGG
CGGCTACAGA TCGGGCAGAC CGGCAGCAGC ACCGAGCTAC GGCTCACACC GCAGCCCGAT
GGCAGCATGC GCTGCACCCT GGCGCGCGCG GCCGATGGCG CAGGCAACCC GGGCGGGCCT
GGCAATGACC TCGTGCGCAC GGTGCACGAC GTGCGCGCCG TGCCGGTGGG CGCGCTGCGC
TGGCACTGGC AGGCCGGCAG CGTCGACGGC TGGGTGCAAG ACGCATCCTG GGAGCCGGCC
ACGGGCGCGG ATGCCGGCAC CGGCCTGGGC GCGGCCGGCA ACGCCAGCGA ACTGCGCGCC
CCCTGCAACG GCCGCGTGCT GGCCCTGCCC GCCAGCGTGG GGCAGGCGCT GGCGGCGGGC
GAGACCGTGG TGGTCATCGA ATCCATGAAG CTCGAACACC GCCTGGCCAG CCCCGACGCC
GCGACGCTGG CCGAGTTGCT GGTCGGCCCT GGCCAGCAGG TGTCGCCCGG CCAGGTTCTG
GCGCGCTTTG CGGCGGCAGC GGCATTACCA CCGGAGACAG CCCCATGA
 
Protein sequence
MAESRIRATC AAADTDGCAG GLGARARPMK KLLVANRGEI ARRVIHTAHA MGIATVAVHS 
DPDAQALHVR EATQAVALGG AASADSYLRG DKLLAAARAT GADALHPGYG FLSENADFAQ
AVLDAGLLWV GPPPAAIRAL GNKAAAKALA AAHAVPCLPG YAGADQSPER FAAEARRTGY
PLMVKAVAGG GGRGLRLVTD AAQLPAALAS ARSEALAGFG CGDLLIERAL LHPRHLEVQV
FADAHGACIH LGERDCSVQR RHQKLIEESP SPAVDAALRE RLGACAVALA RAAGYVGAGT
VEFLLEEGQF FLLEMNTRLQ VEHPVTEALA GLDLVEWQLR VARGEPLALA QHQVALQGHA
IEVRLYAEDA QFQPHTGRVL HWSTPPATLF GRAASGALRI DHALEPGSDI PPHYDAMLGK
LIMHAPTREQ AIAALVRALD GTSVLGLPTN RALLAACLDH PRFRSGQALV SFLREPDGAL
HDLRQALLKN ELQVIIPSAL SAIYAENAAA SALPCGLARP LQLRHQGQLH RLTVRECGAG
RLQIGQTGSS TELRLTPQPD GSMRCTLARA ADGAGNPGGP GNDLVRTVHD VRAVPVGALR
WHWQAGSVDG WVQDASWEPA TGADAGTGLG AAGNASELRA PCNGRVLALP ASVGQALAAG
ETVVVIESMK LEHRLASPDA ATLAELLVGP GQQVSPGQVL ARFAAAAALP PETAP