Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1596 |
Symbol | |
ID | 4690881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1780254 |
End bp | 1780979 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849361 |
Product | regulatory proteins, IclR |
Protein accession | YP_996373 |
Protein GI | 121608566 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.134859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGAAGT CGGCGGTGCG CGTATTCGAA TTGCTCGAAA TGTTCGAGGC CGAACGGCGG CCGCTGCGGG TCGCGGACAT CGTCGAGAGG CTTGGCGCGC CCCAGTCGAG TGTCTCGATG CTGCTCAAGT CGCTGGTGGC CCGGGGCTAC ATGGAATTCG ATGCCGCCAA GCGCGAGTAT TGCCCGTCGA TACGGATTTC CTTTCTCGGC GACTGGACGA CGCGCATGCC GGATCGGCCG GAAGCCATTC AGGATGCGAT GCGCCGACTG GCCGCCGAGA CCGGCGAAAC CGTCCTGCTC GGGCGTCAAA GTGGCTTGCA ACTGCAATAT CTGTCGGTCA TCGAATCGCA GCATGCGCTG CGCTTTTCGC CGTCGCCAGG GACGATGCGC CCCATACACC GATCCGCCAT CGGCATTTTG CTGATGAGCC AATTGGAGGA CGAGCAGATC GGTCTGCTCC TGCGCCGCTA CAACGCCGAG GTCGGCAGGG CCGGACATCC GGCGAAGATT GCCGAGACCC TCCGCGCCGT CGCGCTGGCG CGCGACCAAG GACACTATGA ATCGGCGAAT CTCGCGACCA CGGGCGCGGG CGTGATCGCC GCGCTGGTGC AAACCTTGAT CCGTGGCCAG CGGCTTGGTC TTGGCATCGG AGCGCCGATC GAGCGGCTCC ACAGGCGGCG CAAGCAACTG CTGACCGCCG TGCTGGCGGC CGCCAGGAAA TGCTGA
|
Protein sequence | MVKSAVRVFE LLEMFEAERR PLRVADIVER LGAPQSSVSM LLKSLVARGY MEFDAAKREY CPSIRISFLG DWTTRMPDRP EAIQDAMRRL AAETGETVLL GRQSGLQLQY LSVIESQHAL RFSPSPGTMR PIHRSAIGIL LMSQLEDEQI GLLLRRYNAE VGRAGHPAKI AETLRAVALA RDQGHYESAN LATTGAGVIA ALVQTLIRGQ RLGLGIGAPI ERLHRRRKQL LTAVLAAARK C
|
| |