Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1589 |
Symbol | |
ID | 4694500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1775395 |
End bp | 1775787 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639849354 |
Product | endoribonuclease L-PSP |
Protein accession | YP_996366 |
Protein GI | 121608559 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.229274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00909657 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCAGA TACTCCAGCC ACCAGGGTGG GTTCGTCCGC GTGGATATGC CAACGGCATA TCCACGCGTG GCACACTGGT TTTCACTTCA GGGCAACTGG GCTGGGACAG CCAAGAGCAA TTTCACAGTT CACGATACGC CGATCAGGCT ATTCAGGCGT TAAAAAACAT TGTTGCCGTG CTGGCAGAAA CTGGAGCTCG TCCAGAGCAC CTGGTGCGCC TGACTTGGTA TGTGACCGAT CATGATGCAT ATATTGAACA GGCGCGCGAA GTCGGACGAG CATACCGGGA ATTGATTGGC CACTATCCGC CGATGAGCGC CTTCCAGGTT ACAGCATTGA TGGTCGATGG AGCCAAGGTT GAAATTGAAG CTACCGCTGT AATACCGGAT TGA
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Protein sequence | MMQILQPPGW VRPRGYANGI STRGTLVFTS GQLGWDSQEQ FHSSRYADQA IQALKNIVAV LAETGARPEH LVRLTWYVTD HDAYIEQARE VGRAYRELIG HYPPMSAFQV TALMVDGAKV EIEATAVIPD
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