Gene Veis_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1546 
Symbol 
ID4692052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1732967 
End bp1733461 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID639849310 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_996323 
Protein GI121608516 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00380477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACCC TACAGATCGG CGTGCTCATG GGCTCCAGCA GCGACTGGGA CACCATGCGG 
CATGCCGTGC AGATTCTTGA GCAGTTCGGC ATCGCCCATG AGGCCCGCGT GATCTCGGCG
CACCGCATGC CGGACGACAT GTGGGCCTAT GCCGATGCCG CCGCCGGGCG CGGCCTGAAG
GCCATCATCG CCGGGGCCGG GGGCGCCGCC CACCTGCCCG GCATGTTGGC CGCCAAGACC
ACGGTGCCGG TGCTGGGCGT GCCCGTGGCC AGCCGCCATT TGCAGGGCGT CGATTCGCTG
CACAGCATCG TGCAAATGCC CCGGGGCATT CCGGTGGCCA GCTTTGCGAT CGGCAGCGCA
GGCGCGGCCA ATGCCGCGCT GTTTGCGGTG GCCATGCTGG CCAACGAAAA CCCCGCGCTG
CGCCAGCGCC TGCAAGCCTT TCGCGCCGAA CAGACCGAGG CGGCGCGCCG CATGACCCTG
CCGCCCGTCG CATGA
 
Protein sequence
MNTLQIGVLM GSSSDWDTMR HAVQILEQFG IAHEARVISA HRMPDDMWAY ADAAAGRGLK 
AIIAGAGGAA HLPGMLAAKT TVPVLGVPVA SRHLQGVDSL HSIVQMPRGI PVASFAIGSA
GAANAALFAV AMLANENPAL RQRLQAFRAE QTEAARRMTL PPVA