Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1546 |
Symbol | |
ID | 4692052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1732967 |
End bp | 1733461 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639849310 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_996323 |
Protein GI | 121608516 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00380477 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACCC TACAGATCGG CGTGCTCATG GGCTCCAGCA GCGACTGGGA CACCATGCGG CATGCCGTGC AGATTCTTGA GCAGTTCGGC ATCGCCCATG AGGCCCGCGT GATCTCGGCG CACCGCATGC CGGACGACAT GTGGGCCTAT GCCGATGCCG CCGCCGGGCG CGGCCTGAAG GCCATCATCG CCGGGGCCGG GGGCGCCGCC CACCTGCCCG GCATGTTGGC CGCCAAGACC ACGGTGCCGG TGCTGGGCGT GCCCGTGGCC AGCCGCCATT TGCAGGGCGT CGATTCGCTG CACAGCATCG TGCAAATGCC CCGGGGCATT CCGGTGGCCA GCTTTGCGAT CGGCAGCGCA GGCGCGGCCA ATGCCGCGCT GTTTGCGGTG GCCATGCTGG CCAACGAAAA CCCCGCGCTG CGCCAGCGCC TGCAAGCCTT TCGCGCCGAA CAGACCGAGG CGGCGCGCCG CATGACCCTG CCGCCCGTCG CATGA
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Protein sequence | MNTLQIGVLM GSSSDWDTMR HAVQILEQFG IAHEARVISA HRMPDDMWAY ADAAAGRGLK AIIAGAGGAA HLPGMLAAKT TVPVLGVPVA SRHLQGVDSL HSIVQMPRGI PVASFAIGSA GAANAALFAV AMLANENPAL RQRLQAFRAE QTEAARRMTL PPVA
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