| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1393 |
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| Symbol | |
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| ID | 4694393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1552363 |
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| End bp | 1553748 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639849161 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_996175 |
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| Protein GI | 121608368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.435309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA AAGCCTTGGC CTTTTCTTTT GGCGCCATTT TCGTCATCGG TCTGGCGGTT
GCCACGCCGG CATCGGCGCA GGAAAGACTC AGGGTCTGGT GGGTCAAGGC TTTCTACAAA
GGTGAGGACG ACGCGTTGCT GGCAATGATC AAGAAGTTCC AGGCCAGGTA CCCGGCAATC
CAGGTCGAGT TGTCGCAATA CCCGCCTCAA GACACGATTC CCAAAACCAT CGCGGCGCTC
GATGCGGGTG AACCGCCCGA TGTCGCATAT TCCGATGTCT ACGACTTCCA ACTCACCTCC
AAGTGGGCTT ACGAGGGCCG GTTGGAGGAT CTCTCCGGCC TGCTCGGTCC GATGCGTGAG
CGCTTCACTG CCGGCGCTTT CGAGGCCGTC CATCTATACA ACGATGCGGC CAGGCAGCGT
GCCTACTACG CATTTCCTGT CAAGCAGCAA ACCATTCACA TCGTTTACTG GAGGGACATG
CTGGCCGAGG CCGGTTTCAA AGAGACGGAT ATTCCAAAGA ATTGGCAGGA CTACTGGCGC
TTCTGGTGCG AGAAGGTCCA ACCCGCGTAC CGCAAGAAAA CCGGCACTCG CGCATATGGC
ATTGGTCAGC CATTGGGCGT GGACTCGACC GATGCCTCCT GGTCGTTCCT GACTTTCATG
GATGCCTACA ACGTCAGGCT TGTCGATAAC GATGGCAAGC TGTTGGTTGA CGATCCGGCC
GTCCGCCAAG GTTTGATCGA TGCACTGACC GATTACACCT CGTGGTATCT CAAGGGATGC
GTCCCCCCCT CGGCGACGAG TTGGAAGGAC CCGGACAACA ACGTCGCATT CCACAACAAG
ACCATCGTGC TTACGCACAA TCCAACGATT TCCATCGCCG CCAAATGGCT CGATGACATG
GGCAATTCCG TGCTGACCGA TTCCCAACGG GCAACGGCCA GAAAGAATTA CATGGAGCTG
ATTGCAGTCG CCGGCTTCCC GAACAAACCA GACGGCTCCC GAATGACTTA TCGCGCATCG
GTCAAGACGG GCGTCATCTT CAGGGAGGCA AAGAACAAGG CCGCAGCCAA GCAGTTTGTG
GCATTTTTGC TGGACGAGGC GAATTTGACA CCCTACGTGG AGGGAGCACT CGGTCGCTGG
TTTCCCGTCA CAAAGGCGGG CCAGCAAAGC GCATTCTGGC AATCCGACCC GAATCGATCG
ATGGTCCATC AGCAATTTTC AAACGGCACT ACGCCCTTCG AGTTCACCAA GAACTACAAA
TTCACCGCCC TGAACAACGA GAACGTCTGG GCCAAGGCGA TGAACCGCAT CGTCACCGAC
AAAGTACCGG TGGACAAGGC GGTCGACGAG ATGATCGCGC GCATCAAGAC CGTGGCGGCG
CAGTAA
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| Protein sequence | MKSKALAFSF GAIFVIGLAV ATPASAQERL RVWWVKAFYK GEDDALLAMI KKFQARYPAI
QVELSQYPPQ DTIPKTIAAL DAGEPPDVAY SDVYDFQLTS KWAYEGRLED LSGLLGPMRE
RFTAGAFEAV HLYNDAARQR AYYAFPVKQQ TIHIVYWRDM LAEAGFKETD IPKNWQDYWR
FWCEKVQPAY RKKTGTRAYG IGQPLGVDST DASWSFLTFM DAYNVRLVDN DGKLLVDDPA
VRQGLIDALT DYTSWYLKGC VPPSATSWKD PDNNVAFHNK TIVLTHNPTI SIAAKWLDDM
GNSVLTDSQR ATARKNYMEL IAVAGFPNKP DGSRMTYRAS VKTGVIFREA KNKAAAKQFV
AFLLDEANLT PYVEGALGRW FPVTKAGQQS AFWQSDPNRS MVHQQFSNGT TPFEFTKNYK
FTALNNENVW AKAMNRIVTD KVPVDKAVDE MIARIKTVAA Q
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