| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1156 |
|---|
| Symbol | |
|---|
| ID | 4692368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1280022 |
|---|
| End bp | 1281425 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639848932 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_995946 |
|---|
| Protein GI | 121608139 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCC AAGAAAACCC TGCCGGCACC GATTTCAGCG CGCTGGCGCT CAGCCCGGCA
ATGCTGTCGA ACCTGCAGCG GCTGGGCTAC CGGCAGATGA CGCCGATACA GGCGGCCTGC
CTGCCGGCGG CCTTGGCGGG CCAGGACCTG ATCGCCCAGG CGCGCACCGG CAGCGGCAAG
ACGGCGGCCT TTGCGTTGGC CCTGCTGGCC AAGCTCGACC CACGGCGTTT GGCGCTGCAG
GCCCTGGTGC TGTGCCCCAC GCGCGAGTTG GCCGAGCAGG TGGGCAGTGA AATCCGCCGC
CTGGCCCGGG CCGAAGAAAA CACCAGGCTC GTGACCCTGT GCGGCGGCGT GCCGCTGCGC
GGCCAGATGC TCAGCCTCGC GCATGGCGCG CATATCGTGG TCGGCACGCC CGGCCGCGTG
CTCGACCACT TGCAGCGCCA GCAACTGAGC CTGGCGGCGC TGAACACGCT GGTGCTCGAC
GAGGCGGACC GCATGCTCGA CATGGGGTTT TTCGACGCCA TCGCCACGCT GGCGCGCCAG
TGCCCTGGCG CGCGCCAAAC GCTGCTGTTT TCGGCCACCT ACCCCGAAGG CGTTGCCAAG
ATAGGCGCGC AGTTCATGCG TGCGCCGGTG CAGATCACGG CGCAGGCGCG CCATGCCGAA
GGCAAGATCG AGCAGCGCTG GTATGAGCTC GGCCAGAGCC AGCGCCTGCC TGCGGTGGCG
CAGTTGCTCG GGCATTTCCG CCCCGAGTCG GCGATCGCGT TTTGCAACAC CAGGCAGCAA
TGCCGCGACC TGCTGGCCGT GCTGCAGGCG CAGGGCTTTG GCGCTCTGGC CCTGTATGGC
GAGCTCGAGC AGCGCGAGCG CGACCAGGTG CTGGTGCAGT TTGCCAGCCG CAGTTGCTCG
GTGCTGGTGG CCACCGACGT GGCCGCGCGC GGGCTGGACA TTGCCCACCT GGCGGCGGTG
ATCAATGTGG CCGTCAGCCC GGACCCGCAG GTGCATGTCC ACCGTATCGG CCGCACCGGC
CGGGGCGATG CCACAGGCTT GGCGCTGAAC CTGGCAAGCC TGGACGAAAT GGGCGCGGTG
GGCAAGATTG AGCAGTTGCA GGGCTGCGCA TCGCGCTGGT TTCCGCTGAC CGGGCTGACC
CCCACGGGCG CTGGCCCGCT GCTGCCGCCA ATGGTCACGA TACAAATCCT CGGCGGGCGC
AAGCAGAAGA TTCGCGCCGG CGACCTGCTC GGTGCGCTGA CCGGCGAGCT CGGCTTTCGC
CGCGAGCAGA TCGGCAAGAT CGACGTGAAC GATTTTTCGA CCTATGTGGC CGTCGAGCGC
GCCATTGGCG CCCAGGCCGC GCAGCGCCTG AACCAGGGCC GGGTCAAGGG CCGGGCGGTG
AAGGCGCGGC TGGTGGCGGG TTGA
|
|---|
| Protein sequence | MSSQENPAGT DFSALALSPA MLSNLQRLGY RQMTPIQAAC LPAALAGQDL IAQARTGSGK
TAAFALALLA KLDPRRLALQ ALVLCPTREL AEQVGSEIRR LARAEENTRL VTLCGGVPLR
GQMLSLAHGA HIVVGTPGRV LDHLQRQQLS LAALNTLVLD EADRMLDMGF FDAIATLARQ
CPGARQTLLF SATYPEGVAK IGAQFMRAPV QITAQARHAE GKIEQRWYEL GQSQRLPAVA
QLLGHFRPES AIAFCNTRQQ CRDLLAVLQA QGFGALALYG ELEQRERDQV LVQFASRSCS
VLVATDVAAR GLDIAHLAAV INVAVSPDPQ VHVHRIGRTG RGDATGLALN LASLDEMGAV
GKIEQLQGCA SRWFPLTGLT PTGAGPLLPP MVTIQILGGR KQKIRAGDLL GALTGELGFR
REQIGKIDVN DFSTYVAVER AIGAQAAQRL NQGRVKGRAV KARLVAG
|
|---|
| |