Gene Veis_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1138 
Symbol 
ID4694308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1259014 
End bp1260585 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content69% 
IMG OID639848914 
Productgalactarate dehydratase 
Protein accessionYP_995928 
Protein GI121608121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID[TIGR03248] galactarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC TGACCATCCG CATGCATGCC AACGACAACG TCGCCATCGT GGCCAACGAT 
GGCGGTCTGC CCGCAGGCAC GGTGCTGCCC GAAGGTGTTG CGGGTGCCGG CATCACCTTG
CGCGAGCCAT TGCCCCAGGG GCACAAACTG GCGCTGCAAG ACATTGCCGA AGGGGCCGCA
GTGCGCCGCT ACGGCGTCAC CATCGGCTAC GCACTCGCGC CCATTGCCGC CGGCAGTTGG
GTGCACGAGC GCCGGCTGCG AATGCCCTTG GCCCGCGCGC TGCAAGACCT GCCGCTGGCC
ACGGGGCACG CGCCGCCGCC CGAGCCCCTG ACCGGCTACA CCTTCGAGGG CTACCGCAAC
GCCGACGGCT CGGTCGGCAC GCGCAACATC CTGGCCATCA CCACCACCGT GCAATGCGTG
GCCGGTGTGG TGGCCCTGGC GGTGCGCCGC ATACAGACCG AACTGCTGCC CCTGTACCCC
CATGTGGACG ATGTGATCGG CCTGGAGCAC AGCCATGGCT GCGGGGTGGC CATCGACGCG
CCCGAGGCCA TCATCCCCAT CCGCACGCTG CGCAACATCA GCCTGAACCC GAACTTTGGC
GGCGAGGTGA TGGTGGTCAG CCTGGGGTGC GAGAAGTTGC AGCCCGAGCG TTTGCTGCCC
CCAGGCAGTT TTCCGATCAC CGATGGGCGT GACCCGGCCC TGGGCCCCGA GACCATCTGC
CTGCAATCCG ATGCCCATCC GGGCCTGGTG GCCATGATCG AGCACATCGT GCACAGCGCC
CGCCCGCATC TGGAACGCCT GAACGCCCGC CGCCGCCAGA CCCTGCCCGC CAGCGAACTG
GTGCTGGGGG TGCAGTGCGG CGGCAGCGAC GCATTCTCGG GCGTCACCGC CAACCCCGCC
GTGGGCTTTT GCAGCGACCT GCTGGTGCGT GCCGGGGCCA CGGTGATGTT CAGCGAAAAC
ACCGAGGTGC GCGATGCCGT CGAGCAACTC ACCCGCCGCG CCGCCACGCC GGCGGTGGCC
GAGGCCATCG TGCGCGAGCT CGGCTGGTAC GACCGCTATC TGGAGCGCGG CCATGTCGAC
CGCGCGGCCA ACACCACGCC GGGCAACCAG GCCGGCGGCC TGTCCAACAT TGTCGAAAAG
GCCATGGGCT CGATCATCAA GAGCGGCACC GCCCCGATCT CGCATGTGCT GGCCCCAGGC
GAAAAGTTGC GCCCGAACCA GCGCGGCCTG GTCTATGCGG CCACGCCCGC CAGCGACTTC
ATCTGCGGCA CGCTGCAACT GGCTGCGGGC ATGAACCTGC ATGTCTTTAC CACCGGCCGG
GGCACCCCCT ATGGCCTGGC CGAATGCCCG GTGGTCAAAG TGGCCACGCG CTCCGACCTG
GCCCGCCGTT GGCATGATCT GATGGACCTG AACGCCGGCA AGATCGCTGA CGGCCAGGCC
AGCATCGAGA CCCTGGGCTG GGAGTTGTTC CACCTGCTGC TCGACGTGGC CAGTGGCCGC
AAGAAGACCT GGGCCGAGCG GTGGAAGCTG CACAACGCGC TGGTGCTGTT CAACCCGGCG
CCGGTCACCT GA
 
Protein sequence
MPALTIRMHA NDNVAIVAND GGLPAGTVLP EGVAGAGITL REPLPQGHKL ALQDIAEGAA 
VRRYGVTIGY ALAPIAAGSW VHERRLRMPL ARALQDLPLA TGHAPPPEPL TGYTFEGYRN
ADGSVGTRNI LAITTTVQCV AGVVALAVRR IQTELLPLYP HVDDVIGLEH SHGCGVAIDA
PEAIIPIRTL RNISLNPNFG GEVMVVSLGC EKLQPERLLP PGSFPITDGR DPALGPETIC
LQSDAHPGLV AMIEHIVHSA RPHLERLNAR RRQTLPASEL VLGVQCGGSD AFSGVTANPA
VGFCSDLLVR AGATVMFSEN TEVRDAVEQL TRRAATPAVA EAIVRELGWY DRYLERGHVD
RAANTTPGNQ AGGLSNIVEK AMGSIIKSGT APISHVLAPG EKLRPNQRGL VYAATPASDF
ICGTLQLAAG MNLHVFTTGR GTPYGLAECP VVKVATRSDL ARRWHDLMDL NAGKIADGQA
SIETLGWELF HLLLDVASGR KKTWAERWKL HNALVLFNPA PVT