Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1138 |
Symbol | |
ID | 4694308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1259014 |
End bp | 1260585 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639848914 |
Product | galactarate dehydratase |
Protein accession | YP_995928 |
Protein GI | 121608121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC TGACCATCCG CATGCATGCC AACGACAACG TCGCCATCGT GGCCAACGAT GGCGGTCTGC CCGCAGGCAC GGTGCTGCCC GAAGGTGTTG CGGGTGCCGG CATCACCTTG CGCGAGCCAT TGCCCCAGGG GCACAAACTG GCGCTGCAAG ACATTGCCGA AGGGGCCGCA GTGCGCCGCT ACGGCGTCAC CATCGGCTAC GCACTCGCGC CCATTGCCGC CGGCAGTTGG GTGCACGAGC GCCGGCTGCG AATGCCCTTG GCCCGCGCGC TGCAAGACCT GCCGCTGGCC ACGGGGCACG CGCCGCCGCC CGAGCCCCTG ACCGGCTACA CCTTCGAGGG CTACCGCAAC GCCGACGGCT CGGTCGGCAC GCGCAACATC CTGGCCATCA CCACCACCGT GCAATGCGTG GCCGGTGTGG TGGCCCTGGC GGTGCGCCGC ATACAGACCG AACTGCTGCC CCTGTACCCC CATGTGGACG ATGTGATCGG CCTGGAGCAC AGCCATGGCT GCGGGGTGGC CATCGACGCG CCCGAGGCCA TCATCCCCAT CCGCACGCTG CGCAACATCA GCCTGAACCC GAACTTTGGC GGCGAGGTGA TGGTGGTCAG CCTGGGGTGC GAGAAGTTGC AGCCCGAGCG TTTGCTGCCC CCAGGCAGTT TTCCGATCAC CGATGGGCGT GACCCGGCCC TGGGCCCCGA GACCATCTGC CTGCAATCCG ATGCCCATCC GGGCCTGGTG GCCATGATCG AGCACATCGT GCACAGCGCC CGCCCGCATC TGGAACGCCT GAACGCCCGC CGCCGCCAGA CCCTGCCCGC CAGCGAACTG GTGCTGGGGG TGCAGTGCGG CGGCAGCGAC GCATTCTCGG GCGTCACCGC CAACCCCGCC GTGGGCTTTT GCAGCGACCT GCTGGTGCGT GCCGGGGCCA CGGTGATGTT CAGCGAAAAC ACCGAGGTGC GCGATGCCGT CGAGCAACTC ACCCGCCGCG CCGCCACGCC GGCGGTGGCC GAGGCCATCG TGCGCGAGCT CGGCTGGTAC GACCGCTATC TGGAGCGCGG CCATGTCGAC CGCGCGGCCA ACACCACGCC GGGCAACCAG GCCGGCGGCC TGTCCAACAT TGTCGAAAAG GCCATGGGCT CGATCATCAA GAGCGGCACC GCCCCGATCT CGCATGTGCT GGCCCCAGGC GAAAAGTTGC GCCCGAACCA GCGCGGCCTG GTCTATGCGG CCACGCCCGC CAGCGACTTC ATCTGCGGCA CGCTGCAACT GGCTGCGGGC ATGAACCTGC ATGTCTTTAC CACCGGCCGG GGCACCCCCT ATGGCCTGGC CGAATGCCCG GTGGTCAAAG TGGCCACGCG CTCCGACCTG GCCCGCCGTT GGCATGATCT GATGGACCTG AACGCCGGCA AGATCGCTGA CGGCCAGGCC AGCATCGAGA CCCTGGGCTG GGAGTTGTTC CACCTGCTGC TCGACGTGGC CAGTGGCCGC AAGAAGACCT GGGCCGAGCG GTGGAAGCTG CACAACGCGC TGGTGCTGTT CAACCCGGCG CCGGTCACCT GA
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Protein sequence | MPALTIRMHA NDNVAIVAND GGLPAGTVLP EGVAGAGITL REPLPQGHKL ALQDIAEGAA VRRYGVTIGY ALAPIAAGSW VHERRLRMPL ARALQDLPLA TGHAPPPEPL TGYTFEGYRN ADGSVGTRNI LAITTTVQCV AGVVALAVRR IQTELLPLYP HVDDVIGLEH SHGCGVAIDA PEAIIPIRTL RNISLNPNFG GEVMVVSLGC EKLQPERLLP PGSFPITDGR DPALGPETIC LQSDAHPGLV AMIEHIVHSA RPHLERLNAR RRQTLPASEL VLGVQCGGSD AFSGVTANPA VGFCSDLLVR AGATVMFSEN TEVRDAVEQL TRRAATPAVA EAIVRELGWY DRYLERGHVD RAANTTPGNQ AGGLSNIVEK AMGSIIKSGT APISHVLAPG EKLRPNQRGL VYAATPASDF ICGTLQLAAG MNLHVFTTGR GTPYGLAECP VVKVATRSDL ARRWHDLMDL NAGKIADGQA SIETLGWELF HLLLDVASGR KKTWAERWKL HNALVLFNPA PVT
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