Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1090 |
Symbol | |
ID | 4693847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1215304 |
End bp | 1216065 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639848870 |
Product | regulatory proteins, IclR |
Protein accession | YP_995884 |
Protein GI | 121608077 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.102092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCATC CCAACGACCG CTATCGCGCC CCCGCCCTGG ACAAGGGACT GGACATTCTG GAACTGCTCG CCGAGCAGCC GCATGGCCTG ACGCGCGCCG AGATCGTCAA AGCCATGGGC CGCAGCCCGA GCGAGATTTA CCGGATGCTC GAGCGCCTGG TCGCGCGGCA CTACGTGACG CGCTCGCAGC AGGGCGACCG CCATGCGCTC AGTCTCAAGC TGTTCGAGCT GGGCCACCGC CATCCCCCCA TCGAGCGCCT GGTGGCGCAG GCCCTGCCGG CGATGGAGGC TTTCGCCAAG GCGTCCGAGC AGTCCTGCCA TCTCGGCATT TACAGCCGCG GCAACGTGAC CGTGGTGGCG CAGGTCAACG GCCCGGGCAA TTGGGGGCTG ACCCTGCGCC TGGGTGTGCG GGTGGGCCTG GTGGACACCG GCTCGGGCCA TGTGCTGCTG GCCTTCCAAT CCGAGCAGCG GCGCGCCCAG ATGCTGGCAG AGCATGACGC CCTCGATGGC GAGCGGCCCA TGCCCGAGCC GCAGTTGCAG CCTCTTTTGC AGCGCGTCCG CGCGCTCGGC TACTGGCAGG GCGACAGTCA GCAGGCTTTT GGTGTGGTCG ACATCTCGAT GCCGGTGCTG GGGTTGCAAG GCAATGCGCT GGCGGTATTG ACCTGCCCCT TCGTGCGGCG CATCGACCGC CCGCAAGGCC CCGGCCTGGA TGCAGCGCGG CAATTGCTCG CCAGCGCCGC CAGCGAGCTA TCGATTGCCT GA
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Protein sequence | MAHPNDRYRA PALDKGLDIL ELLAEQPHGL TRAEIVKAMG RSPSEIYRML ERLVARHYVT RSQQGDRHAL SLKLFELGHR HPPIERLVAQ ALPAMEAFAK ASEQSCHLGI YSRGNVTVVA QVNGPGNWGL TLRLGVRVGL VDTGSGHVLL AFQSEQRRAQ MLAEHDALDG ERPMPEPQLQ PLLQRVRALG YWQGDSQQAF GVVDISMPVL GLQGNALAVL TCPFVRRIDR PQGPGLDAAR QLLASAASEL SIA
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