Gene Veis_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1007 
Symbol 
ID4693419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1119663 
End bp1120031 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID639848785 
Producttype IV pilus assembly PilZ 
Protein accessionYP_995802 
Protein GI121607995 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3215] Tfp pilus assembly protein PilZ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC CATCGACCAC GCCGGCCGCG CCCCGCCCCA GCGTGATACA ACTGGCCATC 
AAGGAAAAGC CGGCCTTGCA TATGGCCTAC ATCCCCTTGT TTACCGATGG GGGCATCTTC
GTGCCCACCC ACAAGGACTA CAAACTCGGC GACGATGTCT ATGTGCTGCT GACGCTGCCC
GATGACACGC AGCGCTACCC GGTGGCCGGC CGCGTGGCCT GGGTGACCCC GGCCCGGGCT
GCGGGCAACC GCACCCAGGG TGTGGGCATA CAGTTTCCCA AGGACGACAA GTCGCGCCAG
CTCAAGCTCA AGATCGAGAC CCTGCTAGGC TCGGCGCTGG GGTCCGATCG CCCGACACAG
ACCATCTGA
 
Protein sequence
MSNPSTTPAA PRPSVIQLAI KEKPALHMAY IPLFTDGGIF VPTHKDYKLG DDVYVLLTLP 
DDTQRYPVAG RVAWVTPARA AGNRTQGVGI QFPKDDKSRQ LKLKIETLLG SALGSDRPTQ
TI