Gene Veis_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0995 
Symbol 
ID4693211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1107959 
End bp1108810 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID639848773 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995790 
Protein GI121607983 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCA AAACCTCGCT GCGTCTGTTT CTGGCGCTGT TTACCGCCGG GTTCATCGTG 
TTCCTGTATG GCCCGATGGT GGTGCTGAGC ATCCTGAGCT TTCAGACCGG CCCCGAGGGC
GGCCCGCAGT TTCCCATCAT CGAATGGTCC TCTTACTGGT ACCGGCACCT GCTCGGGTGG
GCTGCGCCGT CGCGCGTCGC GCCGTTGGAT CTGGGCCCGG CCCTGCTCCG GTCGCTGGCG
CTGGCGCTGG CAACGACGGT GGTCGCAACG GTTCTCGGGG TGCTTTCGGC GCAAGCCTTC
CGGCGGCGCT TTCGGGCTTC GGGGCTGGTC TTTTATCTGA TCGTGCTGGG CATGATCGTG
CCGGGCATCC TGGTCGGCCT GGGCGTCGCG CTGCTGGCCA ATATGCTGGG CCTGCCGCGC
GCATGGTGGG GCAGCTCGTT CGTGGTCCAT GTGGTCTACG CCTACCCGTT CGCCTTCCTG
GTGATGCTGG CTGTCTTCAA CCGCTTCGAC CGCTCGCTCG AAGAGGCCGC CTGGAGCCTC
GGGGTCAGCC CCGCCACGAC CTTCCGGCGC ATCACTTTCC CGTTGATTTT CCCGGGGGTG
CTCAGCGCGA TGCTGTTCTC GTTCACGCTG TCGTATGACG AATTCTCGCG CACGCTGTTC
ACCGCCGGCG GCCAGCAGAC GCTGCCGTTG ACCATCTACG GCTCTTTCTC GGTCGAGATC
CATCCCAACC TCTTTGCGTT CGGCGTGCTG ACGACCTTGG CCTCGTTCAC CTTGCTGGCC
GTGTATGGCG CGCTGATGGC GCTGACGCTG CGACGCGCCC GGTCGGTCGC GCTGCAAGAG
GAGATCCGGT GA
 
Protein sequence
MQGKTSLRLF LALFTAGFIV FLYGPMVVLS ILSFQTGPEG GPQFPIIEWS SYWYRHLLGW 
AAPSRVAPLD LGPALLRSLA LALATTVVAT VLGVLSAQAF RRRFRASGLV FYLIVLGMIV
PGILVGLGVA LLANMLGLPR AWWGSSFVVH VVYAYPFAFL VMLAVFNRFD RSLEEAAWSL
GVSPATTFRR ITFPLIFPGV LSAMLFSFTL SYDEFSRTLF TAGGQQTLPL TIYGSFSVEI
HPNLFAFGVL TTLASFTLLA VYGALMALTL RRARSVALQE EIR