Gene Veis_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0993 
Symbol 
ID4693176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1105942 
End bp1107033 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID639848771 
ProductABC transporter related 
Protein accessionYP_995788 
Protein GI121607981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGG CACTGCATCT GCACGGTGTG AGCAAATCGT TCGGGCGGGT GACGGCGGTG 
CGCGATGTGT CGCTTGCGGT CGAGCCGGGC GAATACATCA CCATCCTCGG CCCCAGCGGT
TCGGGAAAGT CGAGCATGCT GCGCCTGATC GCCGGGTTCG ATCGTCCCGA TGCGGGCCGG
GTCGAGGTGT TGGGCCGAGA CCTGGCGGGC ACGGCGGTGC ATCAGCGCGG GGTCGGCTTC
GTGTTTCAGT CCTTTGCGCT GTTTCCGCAT CTGAGCGTTT TCGAGAATCT GGCCTTTGGC
CTGCGCTACC GCAAGCATGC GCCGGTGCCC GACCAGGCGC AGATCGGGCG CGCGGTCGAT
GCGGCGCTGG CCTTGGTCGG CTTGGGTGGT CTCGGCCCGC GCAGCATCGC GCAGATATCG
GGCGGGCAAA AGCAGCGTGT TGCGTTGGCG CGCTGTCTGG TCGGCCAACC CGCCGTGGTT
TTGCTCGACG AGCCGCTGGG CGCGCTCGAT GCGAACCTGC GCGATCAGAT GACGCTGGAG
CTCAAGCGCA TACAGCGCCA GCTCGGCAGC ACCTTCTTGC ATGTCACCGG CAATGAGCAA
GAGGCGCTGG CGATCGGCAG CCGCGTGGCC GTGCTCGATC GCGGGGCCTT GGTGCAGATC
GACCGGCCGC GCCGTTTGTT CGAGCAGCCG GCAACGAGCC AGGTGGCCCG CTTGCTCAAC
TGTTTCAACC CCTTGCCGGG GCAGGCCGTC GCCGGGCGCC TGGTGGGGCC GGCGTTGGAT
GTGCCGCTGC CGGGGGCGGC TGCGCAGTTG CGCGGGGCGG CGGTGTGCAT GGTCCGGCGC
GACCGGGTGC AGGTCGATGC GGGCCAGGCG CTGCACGACG GGCACGGCGA CCCCGGCGTG
GCCCGTATCA CGGGCGCGTA CCTGGCCAGT GAATACGCCG GTTCGCGCGT GCTGGCGCTC
TTCGAGACCG GCGTCGGCGC GCATTTCGAG GTCGAGTACC ACCTGAGCCA CCGGCGCCCG
CCGGAATTCG TCCAGGGCCA GCGCTACGCC TTGCATTGGC AGGCGGCTGA CACGCTGGCC
TACGCCGCCT GA
 
Protein sequence
MTAALHLHGV SKSFGRVTAV RDVSLAVEPG EYITILGPSG SGKSSMLRLI AGFDRPDAGR 
VEVLGRDLAG TAVHQRGVGF VFQSFALFPH LSVFENLAFG LRYRKHAPVP DQAQIGRAVD
AALALVGLGG LGPRSIAQIS GGQKQRVALA RCLVGQPAVV LLDEPLGALD ANLRDQMTLE
LKRIQRQLGS TFLHVTGNEQ EALAIGSRVA VLDRGALVQI DRPRRLFEQP ATSQVARLLN
CFNPLPGQAV AGRLVGPALD VPLPGAAAQL RGAAVCMVRR DRVQVDAGQA LHDGHGDPGV
ARITGAYLAS EYAGSRVLAL FETGVGAHFE VEYHLSHRRP PEFVQGQRYA LHWQAADTLA
YAA