| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0792 |
|---|
| Symbol | |
|---|
| ID | 4694614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 876934 |
|---|
| End bp | 877818 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848567 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_995590 |
|---|
| Protein GI | 121607783 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.256903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA GACACGCTTT TGCCTCTACT GCATTGATCG GCGCAGCCAC GCTATCGGGT
GCTTTGACCG CCCCCGGGGC GCAGGCGGCC CGGGCGGCGC CTGCGGCGCC GGCGAAAGTG
GCGCTGCCGC GCACCGACTC GACGCTCGAT CGCGTGCAAA AAAGAGGCGT GCTCAGAGCC
GCAGTCATCC TGGGTCAGGC GCCGTACTTC ACCAAGGACC TGATGACGGG CCAGTGGGGC
GGGGCCTGTA TCGAGATGGC CAACGACATT GCGGCCAAGC TCGGCGTCAG GGTGGAACTG
CTGGAGTCGA CCTGGGGCCA TCAGATCCTC GACCTGCAAT CGGACAAGGT GGATCTCGCC
TTCGCGGTGA ACCCGACCCC GGAGCGCGCG CTGGTCATCG ATTTTGCAAC GCCGATCCTG
GTGCACTCTT TCACCGTGGT CACGCGCAAG GGCTTTCGCA AGCCGCAGAC CTGGGAAGAC
CTGAACCGGC CCGAAGTGCG CATCGCCGTC GACCTGGGCT CGACCCATGA GTCGATTGCG
CGCCGCTATG CGCCCAAAGC CGGTATCAGC GCCTTCAAGA ACCGCGACGA AGCGGTGCTT
GCCGTCGCCA CCGGCCGGGC GGACGTGAAT GTCGTGCTGG CGGTGCTGGC GCTGCCGATG
CTCAAGAAGA ACCCGACCCT CGGCGAGATG GTGATTCCGC GCCCGATCCT CTCGCTGCCG
ACGAACATCG GGACCCGGAT CGAGACCGAC AAACGCTGGC GCGACTTCCT GAGTGTCTGG
GCCGACTACA ACCGAGCGAT CGGGCAGACC CGCGAATGGA TGACCAAAGG CTTGGTAGAA
CTGGGCATCG CTGCGGGCGA CATCCCGGCC GAGATCCACT TTTGA
|
|---|
| Protein sequence | MKRRHAFAST ALIGAATLSG ALTAPGAQAA RAAPAAPAKV ALPRTDSTLD RVQKRGVLRA
AVILGQAPYF TKDLMTGQWG GACIEMANDI AAKLGVRVEL LESTWGHQIL DLQSDKVDLA
FAVNPTPERA LVIDFATPIL VHSFTVVTRK GFRKPQTWED LNRPEVRIAV DLGSTHESIA
RRYAPKAGIS AFKNRDEAVL AVATGRADVN VVLAVLALPM LKKNPTLGEM VIPRPILSLP
TNIGTRIETD KRWRDFLSVW ADYNRAIGQT REWMTKGLVE LGIAAGDIPA EIHF
|
|---|
| |