Gene Veis_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0784 
Symbol 
ID4694984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp866613 
End bp867701 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID639848559 
ProductABC transporter related 
Protein accessionYP_995582 
Protein GI121607775 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.294286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATT CGAGCGTCAC CAACGCGCAC CTGCAACTGC AAGGCGTCGG CGTGAACTTC 
GGCGCGGTCA ACGTCATCGC CGGCCTCGAT CTGTCGGTCC GCAAAGGGGA GATGGTGGCC
CTTCTCGGCC CTTCGGGCTG CGGCAAGACG ACCACGCTCA GAACCATTGC CGGGCTGCAT
CGCTCCTCGT GCGGGCGCAT CACGGTCGGT GGGCGCGACA TCACGCAGTT GCCCATTCAC
GAGCGCGACA TGGGGATGGT GTTTCAAAGC TACGCGCTGT TTCCGCACAT GGATGTGGCG
CGCAATGTGC AGTTCGGCCT GAAGATGCGC AAGCTGCCGG CGCGCGAGGT GCAGGCGCGC
GCGCAGCGGG CGCTGGAGAT GGTGCAACTG GCGCATCTGG CGCAGCGCAA GCCCAGGGAA
CTGTCCGGCG GCCAACAGCA GCGCGTGGCG CTGGCCAGGG CCTTGGTGAT CGAGCCGGCC
ATCTTGCTGC TCGACGAGCC GCTGTCCAAC CTCGATGCCA AGCTGCGCGA CGAGATGCGC
GTGCAGATCC GCGCGTTGCA ACAGCAAAGC GGGATCACGG CGGTCTTCGT GACGCACGAT
CAGGCCGAGG CTTTGTCCAT GTGCGATCGC GTCGTGGTGA TGCGCAGCGG CCGCATCGAG
CAGTTGGGCA CCCCGACCGA GGTCTACGAG CGCCCGGCAA CCGCCTTCGT GGCCCATTTC
GTCGGTCGCA CCAACAAGCT CAAAGGCAGC GTCGATGCCG GCGGCACGCT GACTGCGGCC
GGGCAAGCCA TGAAGGCCCA TGGCCGGCTC GCTCCCGGCG CGGTCGATGT GCTCATCAGG
CCCCATCGCA TCGGCATTGC GTTGCCGCCG GCCCAGGCCG GCGCGCAAGA GCGCAACCGC
ATCGCGGGCG CCATATCGAG CATCAGCTTC GTCGGCGACC TGGTGCAGTA TGGCGTTCGG
GCCGGCAGCG CAGAGTTCGT CGTCGAGGAG GCCACGCAGC GCCATCGCGC CGCGCTGCCC
GTCGGCAGCC ATGTGGTTTT GCACTGGTCG GTTCAAGACA CGCTGGTTTA TCCAGCGGGC
GACGCATGA
 
Protein sequence
MPDSSVTNAH LQLQGVGVNF GAVNVIAGLD LSVRKGEMVA LLGPSGCGKT TTLRTIAGLH 
RSSCGRITVG GRDITQLPIH ERDMGMVFQS YALFPHMDVA RNVQFGLKMR KLPAREVQAR
AQRALEMVQL AHLAQRKPRE LSGGQQQRVA LARALVIEPA ILLLDEPLSN LDAKLRDEMR
VQIRALQQQS GITAVFVTHD QAEALSMCDR VVVMRSGRIE QLGTPTEVYE RPATAFVAHF
VGRTNKLKGS VDAGGTLTAA GQAMKAHGRL APGAVDVLIR PHRIGIALPP AQAGAQERNR
IAGAISSISF VGDLVQYGVR AGSAEFVVEE ATQRHRAALP VGSHVVLHWS VQDTLVYPAG
DA