Gene Veis_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0757 
Symbol 
ID4692739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp838897 
End bp839757 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID639848534 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995557 
Protein GI121607750 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.862949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TGCACCCGAG GGCCGTTCCC TGGTGGCTGT CCGGCCCGGC CCTGGTGCTG 
TTTGCCGCGC TGCTGCTGGT GCCGCTGGCG CTGACGGCGG TGCTGTCGTT GAACATGTTC
GACCCGGCCA CCGGGGTGAA GGCCGGCACG TTCACGCTGG AGCATTACGC CCAGGTGTTT
ACCGACGGGT ACTACCACGC CATCTTCTGG CGCACCTTCT GGATGGCCGC TCTGGTCACG
CTGATCTGCG TGCTCATCGG CGCGCCCGAG GCCTGGATTC TGAGCCGCAT GGGCAAGCCC
TGGCGCACCA TCTTGCTGCT GGTGGTGCTG GCTCCGCTGC TGGTGTCGGT GGTGGTGCGG
GCTTTTGGCT GGAGCCTGCT GCTGGGGCCC GAGGGGCTGG TCAACGGCGC GCTGCAGCGC
ATCGGTATCG GCCCCGTGAA GATGCTCTAC ACCGAGATCG CGGTCGTGGT GGCCTTGGTG
CATGTGATGC TGCCGTTCAT GGTGATTCCG GTGTGGACCT CGCTGCAAAA GCTCGACCCC
GGGGTGGAGA ACGCTGCGCT GTCGCTACAG GCCACGCCGC TGACCACGCT GCGCCGCATC
GTGCTGCCGC AGGTGCTGCC CGGCATTTTG TCGGGCAGTC TGATCGTGTT TGGTCTGGCG
GCCAGCTCGT TTGCCATTCC CGGTCTGCTC GGCGGGCGGC GCCTGAAGAT GGTGGCCACC
GTGGTGTACG ACGAATACCT GCACGCGCTG AACTGGCCGC TGGGCGCCGC GATTGCGCTG
ACCTTGCTGC TGGCCAATCT GGTCGTGATG CTCAGCTACC ACCGGCTGCT GGAAGGCCAT
TACAAAAAGG CACTGGGCTG A
 
Protein sequence
MNLLHPRAVP WWLSGPALVL FAALLLVPLA LTAVLSLNMF DPATGVKAGT FTLEHYAQVF 
TDGYYHAIFW RTFWMAALVT LICVLIGAPE AWILSRMGKP WRTILLLVVL APLLVSVVVR
AFGWSLLLGP EGLVNGALQR IGIGPVKMLY TEIAVVVALV HVMLPFMVIP VWTSLQKLDP
GVENAALSLQ ATPLTTLRRI VLPQVLPGIL SGSLIVFGLA ASSFAIPGLL GGRRLKMVAT
VVYDEYLHAL NWPLGAAIAL TLLLANLVVM LSYHRLLEGH YKKALG