| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0537 |
|---|
| Symbol | |
|---|
| ID | 4692209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 605785 |
|---|
| End bp | 606237 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639848315 |
|---|
| Product | RbsD or FucU transport |
|---|
| Protein accession | YP_995339 |
|---|
| Protein GI | 121607532 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.675456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAG GAATCGACCC CCTGCTCAGC CCCGACCTGC TCCGGCTGCT GGCCGAGATG
GGGCATGACG ATGCGCTGGT GCTGGCCGAC GCCAACTTCA TTGCAATGCG GCCGGGCGCC
GGCACACCGG TGCTGCGCCT GCCCGGCGTG GGCCTGGTGC GCGCGCTACA GGCCGTCACC
AGCCTGCTGC CGCTGGCCGA AGACATACCG CACCCGGTGG CCTACATGCA GGTCGGCGGC
ACCGAGCCGC CGTACCGCTC GGCGCTGCAG CGTGAAGCCG TCGCGCTGCT GGCCGGCCTG
GGTCTCGATA GCGGGCAGGC CGAGGGCGTG GAACGCTTTG CGTTCTACGA GCGCGCGCGC
AAGGCTTACG CCATCGTCGT CACCGGCGAG TTGCAGCCCT GGGGAAATTT CATTTTGCGC
AAAGGCGTGA TCTGCGCCAG CCTGCGCCCC TGA
|
|---|
| Protein sequence | MLKGIDPLLS PDLLRLLAEM GHDDALVLAD ANFIAMRPGA GTPVLRLPGV GLVRALQAVT
SLLPLAEDIP HPVAYMQVGG TEPPYRSALQ REAVALLAGL GLDSGQAEGV ERFAFYERAR
KAYAIVVTGE LQPWGNFILR KGVICASLRP
|
|---|
| |