Gene Veis_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0335 
Symbol 
ID4692056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp379796 
End bp380533 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID639848118 
Productextracellular solute-binding protein 
Protein accessionYP_995143 
Protein GI121607336 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGT CCGTCGATGC CAAAAGCTAC AAGGAAATCA CGATTGCGAC GGACGCGACC 
TATCCGCCCT TCGAGTCGGT GGCAGCCGAT GGCCAGTTGG TCGGTTTCGA GATCGACCTC
AGCCACGCCC TTTGCGAAGA GCTCAAGCTC AAGTGCAGGC TGATCAACGC CTCCTTCGAT
ACCTTGATCC CCGGGCTGGT CACCAGGAAA TCCGACGCGC TGATTACCTC CATGAACATC
AACGATGAGC GCAAGCGCGT GATCGACTTC ACCGATCCCT ACTACCGGAT GGAAAGCCGT
TTCGTTGCCA GGAAAGGCGC CGGCATCGTC ATCTCTGCCG CAGGTTTGAC CGGCAAGACG
ATCGCGGTGC AGGCCGGAAC GTTGCAAGCG AGCTATGTGC GCAAGGTCTA CGGTGACGTG
GCCCGGATCA AGTATTACCA GGGCGGCAGC GAGCCCTTCC TGGAATTGCT CAGCGGCCGC
GCGGATCTGC ATTTCGGCTT CATCGTGCAG GTCAACGACA GCTTTCTGAG CAAGGATGGA
AAGGACTTCG AGTTCATCGG CCCGACCTTG TCCGGCAAGG ATGACAAGAC CCTGGGCGAG
GGCGTGGCGA TCGCGATTCG CAAAGAGGAC AAGGAACTCA AAGCACTGCT CAACCAAGGT
CTGCAAACGT TGCGCAAGAA TGGAACCATG AAAAAGATCA ACGACAAATA CTTCCCCTTC
ACCCTGGTGA TGGATTGA
 
Protein sequence
MALSVDAKSY KEITIATDAT YPPFESVAAD GQLVGFEIDL SHALCEELKL KCRLINASFD 
TLIPGLVTRK SDALITSMNI NDERKRVIDF TDPYYRMESR FVARKGAGIV ISAAGLTGKT
IAVQAGTLQA SYVRKVYGDV ARIKYYQGGS EPFLELLSGR ADLHFGFIVQ VNDSFLSKDG
KDFEFIGPTL SGKDDKTLGE GVAIAIRKED KELKALLNQG LQTLRKNGTM KKINDKYFPF
TLVMD