Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0335 |
Symbol | |
ID | 4692056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 379796 |
End bp | 380533 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639848118 |
Product | extracellular solute-binding protein |
Protein accession | YP_995143 |
Protein GI | 121607336 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGT CCGTCGATGC CAAAAGCTAC AAGGAAATCA CGATTGCGAC GGACGCGACC TATCCGCCCT TCGAGTCGGT GGCAGCCGAT GGCCAGTTGG TCGGTTTCGA GATCGACCTC AGCCACGCCC TTTGCGAAGA GCTCAAGCTC AAGTGCAGGC TGATCAACGC CTCCTTCGAT ACCTTGATCC CCGGGCTGGT CACCAGGAAA TCCGACGCGC TGATTACCTC CATGAACATC AACGATGAGC GCAAGCGCGT GATCGACTTC ACCGATCCCT ACTACCGGAT GGAAAGCCGT TTCGTTGCCA GGAAAGGCGC CGGCATCGTC ATCTCTGCCG CAGGTTTGAC CGGCAAGACG ATCGCGGTGC AGGCCGGAAC GTTGCAAGCG AGCTATGTGC GCAAGGTCTA CGGTGACGTG GCCCGGATCA AGTATTACCA GGGCGGCAGC GAGCCCTTCC TGGAATTGCT CAGCGGCCGC GCGGATCTGC ATTTCGGCTT CATCGTGCAG GTCAACGACA GCTTTCTGAG CAAGGATGGA AAGGACTTCG AGTTCATCGG CCCGACCTTG TCCGGCAAGG ATGACAAGAC CCTGGGCGAG GGCGTGGCGA TCGCGATTCG CAAAGAGGAC AAGGAACTCA AAGCACTGCT CAACCAAGGT CTGCAAACGT TGCGCAAGAA TGGAACCATG AAAAAGATCA ACGACAAATA CTTCCCCTTC ACCCTGGTGA TGGATTGA
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Protein sequence | MALSVDAKSY KEITIATDAT YPPFESVAAD GQLVGFEIDL SHALCEELKL KCRLINASFD TLIPGLVTRK SDALITSMNI NDERKRVIDF TDPYYRMESR FVARKGAGIV ISAAGLTGKT IAVQAGTLQA SYVRKVYGDV ARIKYYQGGS EPFLELLSGR ADLHFGFIVQ VNDSFLSKDG KDFEFIGPTL SGKDDKTLGE GVAIAIRKED KELKALLNQG LQTLRKNGTM KKINDKYFPF TLVMD
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