| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0263 |
|---|
| Symbol | prpE |
|---|
| ID | 4691079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 289973 |
|---|
| End bp | 291883 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848047 |
|---|
| Product | propionyl-CoA synthetase |
|---|
| Protein accession | YP_995072 |
|---|
| Protein GI | 121607265 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.805785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGAT ACGCCGACTT CTACCGCCAG TCCATCGACG ACCGCGACGC ATTCTGGAGC
GAGCAGTCCC GGTTGATCGA GTGGCAGACC CCGCCCCGGC AGATCTGCGA CTACAGCAAC
CCGCCGTTTG CCCAGTGGTT TGTCGGAGGC CGCACCAACC TGTGCCACAA CGCGCTCGAC
CGGCACCTGG CGCGCCGGGC ACGGCAGCCC GCGCTGGTGG CCATCTCCAC CGAAACCGGC
ACCGAGCGCA GCTACAGCTT TGCCGAACTG CACGCCGAGG TGCAGCACAT GGCGGCCGTG
CTGCGCTGCC TGGGCGTGAA AAAGGGCGAT CGCGTGCTGA TCTACCTGCC GATGATTGCC
GAGGCCGTTT TTGCGATGCT CGCCTGCGTG CGCATCGGCG CGCTGCATTC GGTGGTGTTC
GGCGGCTTCG CCTCGGGATC ATTGGCGGCG CGCATCGAAG ACGCCGAACC CGTGCTCGTG
GTCAGCGCCG ATGCCGGCTC GCGCGCCGGC AAGGTGGTGC CCTACAAGCC GCTGCTCGAC
GCGGCCATCG CGCAGTCCAA GCACAAGCCC GCCGCCGTGC TGATGGTCGA CCGGGGCCTG
GCAGAGATGC CGCTGCAACC GGGACGCGAC CACGAATGGG CCTTGCTGCG CGAGCAGCAG
CTCGGCGCCG TGGTGCCCTG CGAGTGGGTC GAGTCCACCC ACCCCAGCTA CACGCTGTAC
ACCAGCGGCA CCACCGGCCG GCCCAAGGGC GTGCAGCGCG ACACGGGCGG ATATACGGTG
GCGCTGGCGG CGAGCATGAA GCATATTTTT TCTGTGGCTG ACGACGGGGC GGCGCCGGCA
GGGGTTTTCT TCACCACCAG CGATATCGGC TGGGTGGTGG GCCACGGCTA CATCATCTAT
GGCCCGCTGA TCGCCGGCAT GACGACCATC CTGTACGAGG GCCTGCCCAT GCGGCCCGAC
GCAGGCGTGT GGTGGAGCAT CGTCGAGAAG TACCGGGTCA CGCACATGTT CTCGGCCCCC
ACGGCGCTGC GGGTGCTGAA AAAGCACGAC CCGCAGTGGT TCGGCAAGTA CAGCGTCAAA
AGCCTCAAAG CCCTGTGGCT GGCCGGCGAG CCGCTCGATG CGCCCACGGC GCAGTGGATC
AGCGACGCGC TGCAGGTGCC GGTGATCGAC AACTACTGGC AGACCGAGAC CGGCTGGCCC
ATCCTGACGC TGGCCAACGG CGTGGAGCCG CAGGTGAGCC GCTTTGGCAG CCCGGGCAAG
GCCATGTATG GCTACCAGAT CAAGCTGATC GACGACACCA GCGGCCAGGA ACTGACCAGC
CCCGGGCACA AAGGCGTGAT CGCCATCGAA GGCCCGCTGC CACCGGGCTG CATGCAGACC
CTGTGGCGCG ACGATGCGCG CTTCGTCGAC ACCTACTGGA AGAGCCTGGC CGGGCGGCTG
ATCTACAACA CCTTCGATTG GGGCCTGCGC GATGCCGATG GCTACCACTT CATCCTGGGC
CGCACCGACG ACGTGATCAA TGTGGCCGGC CACCGCCTGG GCACGCGCGA GATCGAGGAA
TGCATTGCCG CGCACCCGCA GATCGCCGAA GTGGCGGTGG TCGGCGTGGC CGATGCGCTC
AAGGGCCAAC AGGCCATGGC TTTTGCGGTG GCGCGTGACA GCGCGGCGCT GGACTCGGAC
GCTGCGCGCT TGAAGCTCGA AGGCGAGGTG ATGAAACAGG TGGACAGCCA GTTGGGCGCA
GTGGCGCGGC CGTCGCGCGT GCACTTTGTC AGCGCGCTGC CCAAGACCCG CAGCGGCAAA
CTGCTGCGCC GCACCCTGCA AGCCATTGCC GAGCACCGCG ACCCGGGCGA CCTGAGCACG
ATGGAAGACC CGGCGGCGTT GCAGCAGGTG CGGGAGTTGG CAGGAAGATG A
|
|---|
| Protein sequence | MPRYADFYRQ SIDDRDAFWS EQSRLIEWQT PPRQICDYSN PPFAQWFVGG RTNLCHNALD
RHLARRARQP ALVAISTETG TERSYSFAEL HAEVQHMAAV LRCLGVKKGD RVLIYLPMIA
EAVFAMLACV RIGALHSVVF GGFASGSLAA RIEDAEPVLV VSADAGSRAG KVVPYKPLLD
AAIAQSKHKP AAVLMVDRGL AEMPLQPGRD HEWALLREQQ LGAVVPCEWV ESTHPSYTLY
TSGTTGRPKG VQRDTGGYTV ALAASMKHIF SVADDGAAPA GVFFTTSDIG WVVGHGYIIY
GPLIAGMTTI LYEGLPMRPD AGVWWSIVEK YRVTHMFSAP TALRVLKKHD PQWFGKYSVK
SLKALWLAGE PLDAPTAQWI SDALQVPVID NYWQTETGWP ILTLANGVEP QVSRFGSPGK
AMYGYQIKLI DDTSGQELTS PGHKGVIAIE GPLPPGCMQT LWRDDARFVD TYWKSLAGRL
IYNTFDWGLR DADGYHFILG RTDDVINVAG HRLGTREIEE CIAAHPQIAE VAVVGVADAL
KGQQAMAFAV ARDSAALDSD AARLKLEGEV MKQVDSQLGA VARPSRVHFV SALPKTRSGK
LLRRTLQAIA EHRDPGDLST MEDPAALQQV RELAGR
|
|---|
| |