| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0162 |
|---|
| Symbol | |
|---|
| ID | 4690433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 184305 |
|---|
| End bp | 185090 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639847947 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_994972 |
|---|
| Protein GI | 121607165 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.543023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA CCGCCGCGCA ACCGCCGACC GTGCTGGCCA CGAGGGGCCT GGGCAAGCGC
TTTGGCGGCA TCAGCGCCAC CTGCGATGTC ACGCTGGAGT TGAAAAAGGG CGCGCGCCAC
GCGCTCATCG GCCCCAACGG CGCGGGCAAG ACCACGCTGA TCAACCTGCT GACGGGGGTG
CTGGCGCCCT CGGAGGGGAC CATCGTGCTC GACGGCCAGG ACATCACGCG GCTGGCGCCG
CACCAGCGCG TGCGCCGCGG CATGGTGCGC ACCTTCCAGA TCAACCAGTT GTTCGACAGC
CTCACGCCGC AGGAAACCCT GGCGCTCGCC GTCGCGCAGC AGCAGGGACT GGGCGGCCAA
TGGTGGCGGC CTCTGGGCGC GCGCCGCGCG GTGATGCAGC GCTGCGAGCA ACTGCTCGAA
CAGTTTCAAC TGACCAGCGT GATGGCCCAA GAAACGCGCG TGCTGGCCTA CGGCAAGCGC
CGCCTGCTCG AAATCGCGCT GGCGCTGGCC TGCGCGCCGC GCGTGCTGCT GCTCGACGAG
CCTGTGGCCG GCGTGCCCGC CGGCGAGCGC GAAGAACTGC TGCAGACCGT GGCGGCCCTG
CCCGCCGATG TGTCGGTGCT GCTGATCGAG CACGACATGG ACCTGGTGTT CCGCTTTGCC
AGCCGCATGA CGGTACTGGT CAATGGCGCG GTGCTCACCG AGGGCGACCC CGACAGCATC
GCCCGCGACC CGCGGGTTCA GGCGGTGTAC CTGGGCGCAG CAGAACAGGA GTCGGCCCAT
GCCTGA
|
|---|
| Protein sequence | MTQTAAQPPT VLATRGLGKR FGGISATCDV TLELKKGARH ALIGPNGAGK TTLINLLTGV
LAPSEGTIVL DGQDITRLAP HQRVRRGMVR TFQINQLFDS LTPQETLALA VAQQQGLGGQ
WWRPLGARRA VMQRCEQLLE QFQLTSVMAQ ETRVLAYGKR RLLEIALALA CAPRVLLLDE
PVAGVPAGER EELLQTVAAL PADVSVLLIE HDMDLVFRFA SRMTVLVNGA VLTEGDPDSI
ARDPRVQAVY LGAAEQESAH A
|
|---|
| |