Gene Veis_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0136 
Symbol 
ID4692541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp156606 
End bp157499 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID639847921 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_994946 
Protein GI121607139 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCC ACCCTGTCGC CGCCGCTGTT GCTGCTACTG CCGCCGCCAC CGCTGCGCCC 
GGCGGCTGGT TGCAGCGCGC GCTGCGCCAG CGCAACTTTG CCATCGGCGC CGTGCTGGCC
TTGCTGCTCA TCGCGGCCGC CGCCCTGTCC CTGGTCTGGA CGCCTTGGTC GCCCTACGAG
ATGGATCTGG CCGCCAAGCT GCAGCCGCCC ACGCTGAGCC ATTGGCTGGG CACCGACGCC
TTCGGGCGCG ATGTGGCCTC GCTGCTGCTG GTGGGTGCGC GCAACTCGAT CCTGGTGGGC
GTGATCGCGG TGGGCATCGG CCTGAGCGTC GGTTGCGCGC TGGGGCTGCT GGCCGCTGCC
AGGCGTGGCT GGGTGGAGGA GTTGATCATG CGGCTGGCGG ACTTCGGCTT TGCGTTTCCG
GCCATCCTCT CGGCGATCAT GCTGACGGCG GTGTTTGGCG CGGGCATCGT CAACTCCATC
ATCGCCATCG GCATCTTCAA CATACCGACC TTCGTGCGGG TCACCCGCGC ATCGGCCAAC
GCGCTGTGGT CGCGCGAGTA CATCCTGGCA GCGCGCGCCT GCGGCAAGGG CGGCTGGCGC
ATCACGCTCG AACATGTGCT GCCCAACATC TCGTCGGTGC TGGTCGTGCA GGCCACGATA
CAGTTTGCCG TCGCCATCCT GGCCGAGGCG GCGCTGTCCT ACCTGGGGCT GGGCACGCAG
CCGCCGCAGC CATCCTGGGG CCGTATGCTC AGCGAGGCGC AGACGTTGAT GTTCCAGGCG
CCGCTGCTGG CCGTGTGGCC GGGCTTGGCG ATTGCGCTGG CGGTGCTGGG CCTGAACCTG
CTCGGCGATG GTTTGCGCGA CCTGCTGGAC CCGCGCCTGG CGCGAAAGCG CTGA
 
Protein sequence
MASHPVAAAV AATAAATAAP GGWLQRALRQ RNFAIGAVLA LLLIAAAALS LVWTPWSPYE 
MDLAAKLQPP TLSHWLGTDA FGRDVASLLL VGARNSILVG VIAVGIGLSV GCALGLLAAA
RRGWVEELIM RLADFGFAFP AILSAIMLTA VFGAGIVNSI IAIGIFNIPT FVRVTRASAN
ALWSREYILA ARACGKGGWR ITLEHVLPNI SSVLVVQATI QFAVAILAEA ALSYLGLGTQ
PPQPSWGRML SEAQTLMFQA PLLAVWPGLA IALAVLGLNL LGDGLRDLLD PRLARKR