Gene Veis_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0135 
Symbol 
ID4692751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp155644 
End bp156606 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID639847920 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_994945 
Protein GI121607138 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.742019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGT TTTTCCTCAA GCGCTCGATG ACTTTGCTGG CGACGCTGGT CGGCGCGTCC 
ATCGTCGTGT TTCTGGTGCT GGAGATCCTG CCCGGCAACA CCGCCCAGAT CCTGATGGGG
CCGGACGCCG CGCCGGACGC GGTGGCGGCA TTGACCGCCA AGCTCGGGCT CGATCGCCCG
GCCGGGCTGC GCTATTGGGA CTGGGTCAGT GGATTGCTGC AAGGGCGTAT GGGCGACAGC
CATGCCTACA GTTCGCCGGT GCTCGACCTG GTGCTCGAAC GCCTGGCGCT GACGGTTCCG
CTGGCCTCGA TGGCAATGCT CATCACCACG GTGCTGGCGC TGGCCGCCGG GGTCTATGCG
GCGGCGCACC ACAACCGGCT CGGTGACGTG GGGGTGATGG GGCTGGCGCA GGTCGGCATC
GCCATTCCCA ATTTCTGGTT CGCCATCTTG CTGATCTTGC TGTTTTCGGT GCAACTGCGG
TGGTTCTCTG CCGGGGGTTT TCCGGGCTGG ACCGAGGCCG CTGGCGGCAG CCCGCTGGCG
GCCTTCAAGG CGCTGCTGCT GCCGGCCATT GCGCTGGCCG TGGTGCAGGC GGCGATCCTG
GCGCGCATTA CCCGCTCGGC CGTGCTGGAG GTGCTGCGCG AGGACTTTGT GCGCACCGCC
CGGGCCAAGG GGCTTTCGCA GCGGGCCGTG CTCTGGGGCC ATGTGCTGCG CAACGCGATG
ATTCCGATCA TCACCGTGAT GGGGCTGCAG TTTGCCAACC TGCTGGCCGG CACCATCGTG
GTCGAGAATG TGTTTTATCT GCCGGGCCTG GGGCGCCTGA TCTTTCAATC GATCGCCAAC
CGCGACCTGA TCGTGGTGCG CAACTGCGTG CTGCTGCTGG CCGCGATGGT GGTCGTCGTG
AACTTCGCGA TCGACATGCT CTATGCGCTG ATCGACCCGC GCGTCAAGGC CAGCGACATC
TGA
 
Protein sequence
MGLFFLKRSM TLLATLVGAS IVVFLVLEIL PGNTAQILMG PDAAPDAVAA LTAKLGLDRP 
AGLRYWDWVS GLLQGRMGDS HAYSSPVLDL VLERLALTVP LASMAMLITT VLALAAGVYA
AAHHNRLGDV GVMGLAQVGI AIPNFWFAIL LILLFSVQLR WFSAGGFPGW TEAAGGSPLA
AFKALLLPAI ALAVVQAAIL ARITRSAVLE VLREDFVRTA RAKGLSQRAV LWGHVLRNAM
IPIITVMGLQ FANLLAGTIV VENVFYLPGL GRLIFQSIAN RDLIVVRNCV LLLAAMVVVV
NFAIDMLYAL IDPRVKASDI