Gene Veis_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0115 
Symbol 
ID4693489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp140477 
End bp141334 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID639847901 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_994926 
Protein GI121607119 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.381531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTG AATGGTGCGC GCCGGGGCGC TGGTGGCGCG GCAAGCCCCG CGCGCGCGCG 
CTGCTGCGCC TGGGGCTGCC ATGCGCGTGG CTGCTCGGGG TGCTGTTTCT TGCGCTTGCG
GCCGACTGGC TGCCGCTGCC CTCGCCCACC GACATGGACT TCGCGGCCGC AGGGCAAGGC
CCGGGCACGG CGCATCTGCT GGGCCTGGAC CTCGATGGCC GCGACATCTT CGCGCGCCTG
GCGCATGGCG CGCGGGTCTC GCTGATCGTG TGCTCGGTGG CGCCGCTGAT CGGGCTGGTT
TTCGGCTCGG CGCTCGGCTT GCTCGCGGCC TACTACGGCG GCGTGCTGCG CACGGCCATC
CTGGCGCTGC TCGACGCGAT GCTGGCCTTT CCGAGCCTGG TGTTCGCGCT CGGCCTGACG
GTGGTGCTCG GCCCCTCGGT GCACAACGTG GCGCTGGCGC TCGGCGTGAT GTCGATACCG
GCCTTTGCGC GCATCGCCCG CGCCAACGCA TTGCCGTTGA TCGGCCGCGA GTTCGTGCTG
GCCGCGCGCA CCGCAGGGGC CAGCGATTGG CAGATCATGC TGCGCGAGAT CCTGCCGAAC
ATGGCCCTGT CCCTGCTGAC CTACGCGCTG ACCATCACCT CGGTGATGAT CGTTGCCGAA
GGCTCGCTGA GTTTTCTGGG CGTGGGCGTG CCGCCGCCGA CACCGAGTTG GGGCGGCATG
ATCGCCGACG GGCGCGAATC GCTCGAGCGC GTGCCCCATG TCAGCCTGAT TCCGGCGGCC
GCGATGTTCC TGACCGTGCT GAGCCTGAAC CTGTTGGGCG ACGGCCTGCG CCAGCGCCGC
TCGCCGGGTC TGGCATGA
 
Protein sequence
MRAEWCAPGR WWRGKPRARA LLRLGLPCAW LLGVLFLALA ADWLPLPSPT DMDFAAAGQG 
PGTAHLLGLD LDGRDIFARL AHGARVSLIV CSVAPLIGLV FGSALGLLAA YYGGVLRTAI
LALLDAMLAF PSLVFALGLT VVLGPSVHNV ALALGVMSIP AFARIARANA LPLIGREFVL
AARTAGASDW QIMLREILPN MALSLLTYAL TITSVMIVAE GSLSFLGVGV PPPTPSWGGM
IADGRESLER VPHVSLIPAA AMFLTVLSLN LLGDGLRQRR SPGLA