Gene Veis_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0035 
Symbol 
ID4693381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp46637 
End bp48073 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content64% 
IMG OID639847821 
Productcarboxyl-terminal protease 
Protein accessionYP_994846 
Protein GI121607039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.118794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.879403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCACA GACTCAGGAT TGCAGGATGG GTGGCGGTGG GCGTGGTGGC CGGTGCGCTG 
ACCACGGTGT CACTGCAAAC GCTGGCGCGC GGTGCCATGG CGCCGCTGCC GCTGGAGGAG
ATTCAGCAGT TGTCTGCGGT GTTTGGCCTG GTCAAGACCG ACTACGTAGA GCCGGTGGAT
GACAAGAAAC TGATCACCGA CGCCATCGCC GGCATGGTGG CCAGCCTCGA CCCGCATTCC
CAGTATTTCG ACAAGAAGTC CTTCAAGGAA TTTCGCGAAG GCACCTCCGG CCGCTTCGTC
GGTGTGGGCA TCGAGATCAC GCAGGACGAT GGGCTGATCA AGATCGTCTC GCCCATCGAA
GGCTCGCCGG CATTTCGCGC CGGTCTCAAG ACCAACGACC TGATCACCAG GATCGACGAC
ACCGCCGTCA AGGGCCTGAC GCTCAACGAA GCGGTCAAGC GCATGCGGGG CGAGCCTGGC
ACCAAGGTCA CGCTGACCGT CTTCCGCAGG GACGAAAACC GTACCTTCCC CGTCGTCATC
ACGCGCGAAG AGATCAAGAC CCAGTCCGTC AAGGGCCGGC TGCTGGAGCC GGGCTATGCC
TGGATTCGCC TGTCGCAGTT CCAAGAACGC ACGGTCGATG ACTTCGTGCG CAAGGTCGAA
GAGATCTACC GGCAAGAGCC CCAGCTCAAG GGTCTGGTGC TCGATCTGCG CAATGACCCG
GGGGGCTTGC TGGATGCGGC GGTGGCGATT TCGGCCGCGT TCCTGCCCGA GAACGTCACG
GTGGTTTCCA CCAACGGCCA GTTGGCCGAC AGCAAGGCCA TCTTCAAGGC CGCGCCCGAC
TACTACCAGC GCCGTGGCAG TGGCGATCCG CTGCGGCGCC TGCCTGCGGC GCTCAAATCG
GTGCCGCTGG TGGTGCTGGT CAACGAAGGC TCGGCTTCGG CCAGCGAGAT CGTTGCCGGC
GCGCTGCAAG ACCACCAGCG CGCGACCATC ATGGGCAGCC AGACCTTCGG CAAGGGCTCG
GTGCAGACCG TGCGCCCGCT GGGCCCGGAC ACCGGCATCA AACTGACCAC GGCGCGCTAC
TACACCCCCA GCGGCAAATC GATACAGGCC AAGGGCATCG TGCCTGACGT GATGGTCGAC
GAGTCGCAAG AGGGCAACCT GTTTGCCGCG CTGCGCGTGC GCGAGGCCGA CCTGGACAAG
CACCTGGGCA GCGGCCAGGG CGAAGAAAAG AAGGACGAGG CCCGTGAAAA AGCCCGCGAA
GAAGCCCGCC TGCGCCTGGA GGACGAGGCC AAAAAGCCCG TCGCCGACCG CCGGGCGCCG
GAGTTTGGCT CCGACAAGGA CTTCCAGTTG CAGCAAGCGC TCAATCAACT CAAGGGCCAT
GCGGTGCTGG TCAGCAAAAC GCTGACGGAG CGCAAGGAAG AAAAGAAAGA CAATTGA
 
Protein sequence
MGHRLRIAGW VAVGVVAGAL TTVSLQTLAR GAMAPLPLEE IQQLSAVFGL VKTDYVEPVD 
DKKLITDAIA GMVASLDPHS QYFDKKSFKE FREGTSGRFV GVGIEITQDD GLIKIVSPIE
GSPAFRAGLK TNDLITRIDD TAVKGLTLNE AVKRMRGEPG TKVTLTVFRR DENRTFPVVI
TREEIKTQSV KGRLLEPGYA WIRLSQFQER TVDDFVRKVE EIYRQEPQLK GLVLDLRNDP
GGLLDAAVAI SAAFLPENVT VVSTNGQLAD SKAIFKAAPD YYQRRGSGDP LRRLPAALKS
VPLVVLVNEG SASASEIVAG ALQDHQRATI MGSQTFGKGS VQTVRPLGPD TGIKLTTARY
YTPSGKSIQA KGIVPDVMVD ESQEGNLFAA LRVREADLDK HLGSGQGEEK KDEAREKARE
EARLRLEDEA KKPVADRRAP EFGSDKDFQL QQALNQLKGH AVLVSKTLTE RKEEKKDN