Gene Vapar_6362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6362 
Symbol 
ID7975684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp1111606 
End bp1112046 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content71% 
IMG OID644796929 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_002948188 
Protein GI239821003 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.450102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGG AACAGATCAA GACGCTCATC GACGCACTCG CGGCCTCGGA CCTCGCGGAG 
CTGGAGTACA GCGAGGACGG CAGCACATTG CGGCTGGTGA AGCAATCGGC GCTGGCGGCC 
GCGCCCGCAG CCGCGCGGCG CCCGGCTGCT GCTGCGCGCA AGGCGCCCAC CGCGGAGTCT 
GCGCAGCAGG CACCGCCGCC AGCCGCAGCG GCCGAATGCC TTGCGCCGCT CTACGGCGTG 
GTGCACCTGC AGTCCGCGCC GGGCGAGCCG CCCTTCGTGC AGCCGGGGCA GGCCGTCGAG 
GCCGGCCAGA TGCTCTGCGT GATCGAGGCC ATGAAGATGT TCAACGAAGT CCGCGCCGAC 
GCCGCTGCCA CCGTGCAGGC CGTGCTGGTG CGTTCGGGCC AGGAAGTGGA AGCAGGCGAG 
CCCCTGTTCC GCCTCGGCTG A
 
Protein sequence
MKQEQIKTLI DALAASDLAE LEYSEDGSTL RLVKQSALAA APAAARRPAA AARKAPTAES 
AQQAPPPAAA AECLAPLYGV VHLQSAPGEP PFVQPGQAVE AGQMLCVIEA MKMFNEVRAD 
AAATVQAVLV RSGQEVEAGE PLFRLG