| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6331 |
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| Symbol | |
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| ID | 7975653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1068010 |
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| End bp | 1068567 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796900 |
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| Product | intracellular protease, PfpI family |
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| Protein accession | YP_002948159 |
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| Protein GI | 239820974 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.219565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA CCCAACTCGA TGGTGCCAAG GTCGCCATTC TCGTGGCCGA CGGCTTCGAG
CAAGCCGAGA TGACGGAGCC GCGCAAGGCG CTCGATGCGG CCGGCGCCGC CACCAAGATC
GTCTCGCCGA AGGACAACAC CGTGCGCGGC TGGAAGCACC ACAAGCCAGC CGATGAATTC
AACGTCGACA TACCGCTGCC GCAGGCCGCC GCGCACGAGT TCGATGCGCT CGTGCTGCCC
GGCGGAGTCA TGAACCCCGA TGCGCTGCGC ATCAACGAGG AGGCCATCGC CTTCGTGCGC
GATTTCTTCA AGGCCGGCAA GCCGGTGGCC GCGATCTGCC ACGGACCGTG GACGCTGATC
GAGGCCGACG CGGTGCGCGG CCGCACGATG ACCTCGTGGC CCTCGCTGCG CAGCGACCTC
ACGAATGCCG GCGCCAAGTG GGTCGACCGC GAGGTGGTGG TCGACGGCAA CCTCATCACC
AGCCGCAAGC CGCAGGACCT GCCGGCCTTC GACCGCGAGA TGGTCCGGCT GTTCGCGGAT
GCGCGGGCGC ACGCCTGA
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| Protein sequence | MSKTQLDGAK VAILVADGFE QAEMTEPRKA LDAAGAATKI VSPKDNTVRG WKHHKPADEF
NVDIPLPQAA AHEFDALVLP GGVMNPDALR INEEAIAFVR DFFKAGKPVA AICHGPWTLI
EADAVRGRTM TSWPSLRSDL TNAGAKWVDR EVVVDGNLIT SRKPQDLPAF DREMVRLFAD
ARAHA
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