Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6304 |
Symbol | |
ID | 7975626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 1043562 |
End bp | 1043849 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644796874 |
Product | hypothetical protein |
Protein accession | YP_002948133 |
Protein GI | 239820948 |
COG category | [S] Function unknown |
COG ID | [COG5572] Predicted integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.618316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC GTTCTTTCGC GATCACCGCT CTTGCACTGG GTGCCCTTGC CGCGGGCTCA GCCATGGCGC AAGACAAACC GATGGCCGAC AAGATGGCCG CCATGGAAAA GTGCTACGGC GTCTCGATGG CCGGCAAGAA CGACTGCGCC GCCGGCCCCG GCACCACCTG CGCGGGCACC TCCAAGGTCG ACTACCAGGG CAACTCGTGG AAGAACGTTC CGGCCGGCAC CTGCACCACC ATCAAGACAC CCAAGGGCAT CGGTTCGCTG ATGCCGATCA AGTCCTGA
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Protein sequence | MINRSFAITA LALGALAAGS AMAQDKPMAD KMAAMEKCYG VSMAGKNDCA AGPGTTCAGT SKVDYQGNSW KNVPAGTCTT IKTPKGIGSL MPIKS
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