Gene Vapar_6302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6302 
Symbol 
ID7975624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp1041651 
End bp1042040 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID644796872 
Producthypothetical protein 
Protein accessionYP_002948131 
Protein GI239820946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGCT ATCGCCTCCC CCGACATTGC ATGACCGCGT TCCTCGTGGT CCTGTCGCTG 
CTGTTCTCGC AACTGGCGCT GGCAAGCTAT GTCTGTCCCG GGGCAGCGGG CACGGCATCG
ACGGCCGGGA TGGCGATGGC GCCGGGCGAG CCCTGCGAGG GCATGGACAC CGCCCAGCCC
GTGCTGTGCC ACCAGCATGC CGCCGACATG TCGCTGTCGT TCGAACCGGT GAAGGCCGCC
ACGCCTTCGC TGCCTGCCAT CGTGCAGGTA TTGGCCGTGC CGCTGGTGCT GGCAGCGCTG
GCCGAGCCGC TCCCGCGCCA GGCACTGCCC GAGCGGCAGC ATCCGCCGCC TGGTCCTGTT
TTTCTTGCGA CTCTCAGACT TCGCGTCTGA
 
Protein sequence
MRGYRLPRHC MTAFLVVLSL LFSQLALASY VCPGAAGTAS TAGMAMAPGE PCEGMDTAQP 
VLCHQHAADM SLSFEPVKAA TPSLPAIVQV LAVPLVLAAL AEPLPRQALP ERQHPPPGPV
FLATLRLRV