Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6302 |
Symbol | |
ID | 7975624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 1041651 |
End bp | 1042040 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796872 |
Product | hypothetical protein |
Protein accession | YP_002948131 |
Protein GI | 239820946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGGCT ATCGCCTCCC CCGACATTGC ATGACCGCGT TCCTCGTGGT CCTGTCGCTG CTGTTCTCGC AACTGGCGCT GGCAAGCTAT GTCTGTCCCG GGGCAGCGGG CACGGCATCG ACGGCCGGGA TGGCGATGGC GCCGGGCGAG CCCTGCGAGG GCATGGACAC CGCCCAGCCC GTGCTGTGCC ACCAGCATGC CGCCGACATG TCGCTGTCGT TCGAACCGGT GAAGGCCGCC ACGCCTTCGC TGCCTGCCAT CGTGCAGGTA TTGGCCGTGC CGCTGGTGCT GGCAGCGCTG GCCGAGCCGC TCCCGCGCCA GGCACTGCCC GAGCGGCAGC ATCCGCCGCC TGGTCCTGTT TTTCTTGCGA CTCTCAGACT TCGCGTCTGA
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Protein sequence | MRGYRLPRHC MTAFLVVLSL LFSQLALASY VCPGAAGTAS TAGMAMAPGE PCEGMDTAQP VLCHQHAADM SLSFEPVKAA TPSLPAIVQV LAVPLVLAAL AEPLPRQALP ERQHPPPGPV FLATLRLRV
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