| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6263 |
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| Symbol | |
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| ID | 7975479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1001602 |
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| End bp | 1002516 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796833 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002948092 |
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| Protein GI | 239820907 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCCGGT TCATCCGCAA AGTTACATTC CTTCGCATGG ACACCCGCTA CCTGCAGAGC
TTTGTTGCCG TCGTCGAGCT GGGATCGATG GCCGAAGCGG CACGCCATCT GGACCTGACG
CCTGCGGCCA TTGCGGCGCG CGTCAAGGCG CTGGAGGAAG AGATGGGGCT CTCCCTGGTG
CAGCGGGCGG GGCGCTCCGT TCGCCCCACC GCAGCCGGCC TGAAGATGCT CGACCGGGCG
CGCACCGTGC TGAGGGAAAT CCGCGACCTG CGGGCCGCCG CCGGCGACGG CTTCGCGCTC
GGCGAATTGA AGCTCGGCGT GTTCGGCTCG GCGCTGACGG GCGTGCTGCC GCCCCTGCTC
AAGCGCCTCT ACGATCGGTA CCCGGACCTG TCGGTGTTCG TCGCTCCCGG GAATTCCGTC
GAGCTCTGCC GCCAGGTGAC CCTCGGCGCG CTGGATGCCG CCATCGTCGT CGAGCCCCAG
TTCGCCGTGG GGAAAGGCTG CGCATGGCAC GCGCTGCTGG AGGAAGGGCT CGTGGTGGTG
GCGCCCGCAG GCCTGGCGGA CCGCACTGCC CACCAGTTGC TGGAGACCGA ACCCTTCATT
CGCTACGACC GCTCCGTGCT GGGTGGCCAG CTTGCCGATC GCTATCTTCG CGACAACGGC
CTGGTCGTGA AGCAGCGGCT CGAGATCGAC AACCTGATGG CGATCGCCGC CCTCGTCGGG
CAGGGCCTGG GCGTGGCGCT GCTGCCGGAC TGGTCGCCCA TGTGGCACGT CGGCTACGGC
ATCGTGCCGG TCCCGCTGCC CTCGCGCGCG CCCGTGCGGC GCGTGGGCCT GGTGTGGGCC
ACGCACGGCC CACGCGCTGC CTTGTCGCAG GCGCTGCTGC ACGAAGCGCA GGCCATGTAC
GCTCAGGAAA ACTGA
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| Protein sequence | MFRFIRKVTF LRMDTRYLQS FVAVVELGSM AEAARHLDLT PAAIAARVKA LEEEMGLSLV
QRAGRSVRPT AAGLKMLDRA RTVLREIRDL RAAAGDGFAL GELKLGVFGS ALTGVLPPLL
KRLYDRYPDL SVFVAPGNSV ELCRQVTLGA LDAAIVVEPQ FAVGKGCAWH ALLEEGLVVV
APAGLADRTA HQLLETEPFI RYDRSVLGGQ LADRYLRDNG LVVKQRLEID NLMAIAALVG
QGLGVALLPD WSPMWHVGYG IVPVPLPSRA PVRRVGLVWA THGPRAALSQ ALLHEAQAMY
AQEN
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