| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6256 |
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| Symbol | |
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| ID | 7975472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 993901 |
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| End bp | 994872 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796826 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002948085 |
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| Protein GI | 239820900 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG TCATCCCCGA CGACTACCAG GACTGCGTCC GCACGCTCGA CTGCTTCGGC
AAGCTCGCTG GACACGATGT CCGCATCTTC AACGACACGG TGAAGGGCAC CGATGAACTC
GCGGCGCGTT TCGCGGATGC CGAGGCCATC GTGCTCACCC GCGAGCGCAC GCGCATCGAT
GCGGCGCTGC TCGAGCGGCT GCCCCGGTTG CGTCTCATCA GCCAGACCGG CAAGCTGGCG
GGCCACGTCG ATCTCGCGGC CTGCACCGCC CGCGGCGTGG CGGTGGCCGA AGGCAGCGGC
GCGGGTTCGG CCACTGCTGA ACTGACCTGG GCACTGACGC TGGCAAGCCG CCGGCATCTG
GTCGAGGAAG CCACGCGCCT GCGCCAGGGT CGGTGGCAGG GCCACCTGGG CCAGCAGCTC
GGCGGCCAGC GTCTGGGCGT GTGGAGCTAC GGGCGCATCG GCCGCCAGGT GGCCGCCTAC
GGGCGCACGT TCGGCATGAA GGTCTGGGTG TGGGGGCGCG AGGGCTCGAC TGCGGCGGCA
CGCGCAGACG GCTTCGAAGT CGCGCCCTCG CGCGAGGCCT TCTTCGCACA GAGCGACGTG
GTCAGCCTGC ATGTGAGGCT CGACGAGCAC ACCCGGGGCA TGGTCTCGGA CGAAGACCTG
GCCCGCATGA AGGCCAGCGC CCTGCTGGTG AACACCAGCC GCGCCGAACT GGTCGCGCCC
GGTGCGCTGG AACGCGCGCT GGCGGCGGGC CGGCCGGGCT TCGCGGCCGT GGACGTGTTC
GAGGAAGAGC CCGTACGCGC CGGCGAACAT CCGCTCCTGC ATCTGCCCAA TGCGCTGTGC
ACGCCGCACA TCGGCTATGT CGAGCGCGAC AACTACGAGC GCTACTTCGG CATCGCCTTC
GACCACGTCA ACGCGTTTGC CGCGGGGCGC CTGAAGGACG CGCTCAACCC CTCGGTCCTG
CGCCCGGGCT AG
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| Protein sequence | MRIVIPDDYQ DCVRTLDCFG KLAGHDVRIF NDTVKGTDEL AARFADAEAI VLTRERTRID
AALLERLPRL RLISQTGKLA GHVDLAACTA RGVAVAEGSG AGSATAELTW ALTLASRRHL
VEEATRLRQG RWQGHLGQQL GGQRLGVWSY GRIGRQVAAY GRTFGMKVWV WGREGSTAAA
RADGFEVAPS REAFFAQSDV VSLHVRLDEH TRGMVSDEDL ARMKASALLV NTSRAELVAP
GALERALAAG RPGFAAVDVF EEEPVRAGEH PLLHLPNALC TPHIGYVERD NYERYFGIAF
DHVNAFAAGR LKDALNPSVL RPG
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