| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6251 |
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| Symbol | |
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| ID | 7975467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 988689 |
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| End bp | 990683 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796821 |
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| Product | acetate/CoA ligase |
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| Protein accession | YP_002948080 |
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| Protein GI | 239820895 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGC CCAACCCCAT CGAATCCGTC CTGGTCGAGA ACCGCGTGTT CCCTCCTGAC
GCCCGCGCCA GCGCTGGCGC GCGCATTGCC GGCATGGCCG CCTACGAGGC CCTGTGCCAG
GAAGCCGAAC AGGACTTCGA AGGCTTCTGG AGCCGCCTGG CGCGCGAGAA CCTGAGCTGG
ACCCAGCCCT TCAGCCGCAC CCTGGACGAA TCCAACGCCC CCTTCTACCA ATGGTTCGGC
GACGGCGAAC TCAACGCCAG CGCCAACTGC CTGGACCGCC ACATCGGCAC CCCCGTCGAA
CACAAGACCG CCATCGTCTT CGAAGCCGAC GACGGCGCCG TCACCCGCGT CAGCTACAAG
GAACTGCTCG CCCGCGTGAG CCAGTTCGCC AACGCCCTGA AGGCCGCCGG CATCGGCAAG
GGCGACCGCG TCATCATCTA CATGCCCATG ACCATCGAGG GCGTGGTCGC CATGCAGGCC
TGCGCGCGCA TCGGCGCCAC CCACAGCGTG GTGTTCGGCG GCTTCTCCGC CAAGGCCCTG
CAGGAGCGCA TCATCGACGC CGGCGCCGTG GCCGTCATCA CCGCCAACTA CCAGCTGCGC
GGCGGCAAGG AACTGCCCCT CAAGGCCATC GTCGACGACG GCATTGCCCT GGGCGGCTGC
GAATCGATCC GCACCGTCTT CGTCTACGAA CGCACCGCCA GCGCCTGGGC GCGTGTCGAA
GGCCGCGACA AGACCTTCGC CGAAGCGCTC CAGGGCCAGA GCACCGACTG CCCGCCCGTG
CCGGTGAATG CCGAGCACCC CCTCTTCATC CTCTACACCT CCGGCTCCAC CGGCAAGCCC
AAGGGCGTGC AGCACGCCAC CGGCGGCTAC CTGCTGTGGG CCCGGCTCAC CATGGACTGG
ACCTTCGACA TCCGGCCCGA GGACGTCTTC TGGTGCACCG CCGACATCGG CTGGATCACC
GGCCACACCT ACGTCGCCTA CGGCCCGCTC GCCGCCGGCG CCACCCAGGT CGTGTTCGAG
GGCATCCCCA CCTTCCCGCA CGCCGGGCGC TTCTGGCAGA TGATCGAGCG GCACCAGGTC
AGCGTCTTCT ACACCGCCCC CACCGCCATC CGCTCGCTCA TCAAGGCCGC CGAATCGGAC
GAGAAGGTGC ACCCGAAGAA CTGGAACCTG GACAGCCTGC GCATCCTCGG CTCGGTTGGC
GAGCCCATCA ACCCCGAAGC CTGGATGTGG TACCACCGGA ACATCGGCCA TGAGAAATGT
CCGATCGTCG ACACCTTCTG GCAGACCGAG ACCGGCGGCC ACGTCATCAC GCCCTTGCCG
GGCGCCACGC CGCTGGTGCC GGGCTCGTGC ACCCTGCCGC TGCCGGGCAT CATGGCCGCC
ATCGTGGACG AGACCGGCAA GGACCTGCCC AACGGCGCGG GCGGCATGCT GGTCATCAAG
CGGCCCTGGC CCTCGATGAT CCGCACCATC TGGAACGACC CCGAGCGCTT CAAGAAGAGC
TACTTCCCCG AGGAGATGGG CGGCACCATC TACCTGGCCG GGGACGGCGC GGTGCGCAGC
GAAGACCGCG GCTACTTCCG CATCACGGGC CGCATCGACG ACGTGCTGAA CGTCTCGGGC
CACCGCCTGG GCACGATGGA GATCGAATCG GCGCTGGTGT CCAAGACCGA CTTGGTGGCC
GAGGCCGCGG TGGTGGGGCG GCCCGACGAC GTGACGGGCG AGGCGGTGTG CGCCTTCGTG
GTGCTCAAGC GCGGGCGCCC GAGCGGCGAG GAGGCCAAGC AGATCGCCAA CGAACTGCGC
GCCTGGGTGG CCAAGGAGAT CGGCCCGATC GCCAAGCCCA AGGACATCCG CTTCGGCGAG
AACCTGCCCA AGACGCGCAG CGGCAAGATC ATGCGGCGCC TGTTGCGCAG CATCGCCAAG
GGCGAGGCCA TCACGCAGGA CATCTCGACG CTGGAAAATC CGGCGATCCT GGAGCAGCTC
GCGCAGAAGA ACTGA
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| Protein sequence | MSLPNPIESV LVENRVFPPD ARASAGARIA GMAAYEALCQ EAEQDFEGFW SRLARENLSW
TQPFSRTLDE SNAPFYQWFG DGELNASANC LDRHIGTPVE HKTAIVFEAD DGAVTRVSYK
ELLARVSQFA NALKAAGIGK GDRVIIYMPM TIEGVVAMQA CARIGATHSV VFGGFSAKAL
QERIIDAGAV AVITANYQLR GGKELPLKAI VDDGIALGGC ESIRTVFVYE RTASAWARVE
GRDKTFAEAL QGQSTDCPPV PVNAEHPLFI LYTSGSTGKP KGVQHATGGY LLWARLTMDW
TFDIRPEDVF WCTADIGWIT GHTYVAYGPL AAGATQVVFE GIPTFPHAGR FWQMIERHQV
SVFYTAPTAI RSLIKAAESD EKVHPKNWNL DSLRILGSVG EPINPEAWMW YHRNIGHEKC
PIVDTFWQTE TGGHVITPLP GATPLVPGSC TLPLPGIMAA IVDETGKDLP NGAGGMLVIK
RPWPSMIRTI WNDPERFKKS YFPEEMGGTI YLAGDGAVRS EDRGYFRITG RIDDVLNVSG
HRLGTMEIES ALVSKTDLVA EAAVVGRPDD VTGEAVCAFV VLKRGRPSGE EAKQIANELR
AWVAKEIGPI AKPKDIRFGE NLPKTRSGKI MRRLLRSIAK GEAITQDIST LENPAILEQL
AQKN
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