| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6215 |
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| Symbol | |
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| ID | 7975431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 945798 |
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| End bp | 946577 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796785 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002948044 |
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| Protein GI | 239820859 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.222073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG CGGACACCAA GGACCGCCAG TTCGCCACCA CGCTCGCGAG CGGCATCGAC
CTGCTGCTGT GCTTTCATCC CGGCGAATCG AGCCTCGCGA ACAAGGACTT TGCGCAGCGC
ACCGGCCTTT CGAAACCCAC GGTCGCGCGC CTGACGCACA CGCTCGCGCT GCTCGGCTAC
CTGCGGCGCG ACCCGGCCAG CGCCAGGTAC CGGCTGGGCG CGGCTGTGCT CGGCCTCGGC
CATCCGCTGC TGGCCAGCAT GCGCATCCGT CCGGTCGCGC GGCCGATGAT GGAAACGCTG
GCGCGCGAGA TCGAAGGCGC CGTCTCGCTC GGGCTGCGCC ACCGCATCCA CATGGTGTAC
GTGGAGACTG CGCGCAGCAG CGAAGACTTC GTGCTGACGC CCGACATCGG CGCGCCGCTT
CCCATGCTGG CCACGGCCAT CGGACGCGCC TGGCTCGCGC GCGCCGCGCC CGAAGAGCGG
CTGTCGGTGC TGAACCAGAT CCGCGTCGCC GCGCCGGCCG AGTTCGAGCG CCATGCCGCG
GCGGCCGAGC TGGCGCGTGA AGAACTGGCG CGCGACGGCT TCTGCAGCGC CCGTGCCGAC
TGGCAGCCGA ACCGGCATGG CTTTGCCGTG CCGCTGCACG GCCTGGTGGA CGGCATGCAG
TTCGTGCTGA ACTGCGCCGT GGCAACCCGG CGCGGCAGCT TCGCGCAGAT GCGCCGGGAG
GCCGCGCCGC GGCTGCTCAC GCTGGCGCAC AGCATCGAGC TTTCGCTGGG CCTGCGATAG
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| Protein sequence | MKDADTKDRQ FATTLASGID LLLCFHPGES SLANKDFAQR TGLSKPTVAR LTHTLALLGY
LRRDPASARY RLGAAVLGLG HPLLASMRIR PVARPMMETL AREIEGAVSL GLRHRIHMVY
VETARSSEDF VLTPDIGAPL PMLATAIGRA WLARAAPEER LSVLNQIRVA APAEFERHAA
AAELAREELA RDGFCSARAD WQPNRHGFAV PLHGLVDGMQ FVLNCAVATR RGSFAQMRRE
AAPRLLTLAH SIELSLGLR
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