| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6211 |
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| Symbol | |
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| ID | 7975101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 941099 |
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| End bp | 942043 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796781 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002948040 |
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| Protein GI | 239820855 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA ACACCACTAC GCAACGCGCC GTGCTGATCA GGGCCTATGG CGGCGCGGCC
GCCGCCGAGG TCGCCGAGAT CGCGCGCCCC GCAGCCGGGC CGGGCCAGGT CATGGTCCGC
GTTCGGGCCG CGGGCGTGAA CGGCATCGAC TGGAAGGTCC GCGAGGGCTT CGTCCGGGAA
GCCTTCCCGC TGCAGCTGCC CGCCGTGCTG GGCATCGAGC TTGCGGGCAC CGTCGAGGCA
CTCGGCCCCG GCGCTTCGCG CTTTCGCGTG GGCGATCGCG TCATGGGGCC GCTGGGCGGG
CTCGGTGCCT ATGCCGATGT CGTGGCCGTA GCCGAGGCGA ACCTGGTGCG CACGCCCCAA
GGCCTGGACG AGGTTCATGC GGCCGGCGTT CCGGTGGCGG CCGTGGCCGC CTGGCAAAGC
CTGCACCACG CGGGTCCGAT CACCGCAGGC CAGCGGATCC TGATCCACGG CGCCGCGGGT
GGACTGGGCG GCTATGCCGT GCAGTACGCC AAGCGGGCGG GTGCCGAAGT GTTCGCGACG
GCATCGACCG CGCACCTCGA ATACGTGCGC AGCCTGGGCG CGGACCACGT CATCGACTAC
CGCACCGAAC ATTTCGAGTC GGTCGCGCAG GACATCGACC TGGTGCTCGA CTACGTCGGC
GGCGAAGTGC TCGATCGCTC GTGGCAGGTG CTGTCGAAGG ACGGCGTGAT CGTCGGCACG
TCCTCGCCCG ACATCCTGGC CCGCACGCCG TCCGGCCGAC GCGGACTGTG GTTCATGAAC
AAGCCGGACA CCGCCCTGCT GGAACGGCTG GTGGCAGAGA TCGCCGAAGG CACGCTGATC
TCCAAGCTCG GCGAAACCGT GGGCTTCGGC GACATCCCCG CGGCCATCGA ACGCAATCGC
ACCGACCCGC GCATCGGCAA GGTGGTCGCG GACTTCTCGC GCTGA
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| Protein sequence | MTTNTTTQRA VLIRAYGGAA AAEVAEIARP AAGPGQVMVR VRAAGVNGID WKVREGFVRE
AFPLQLPAVL GIELAGTVEA LGPGASRFRV GDRVMGPLGG LGAYADVVAV AEANLVRTPQ
GLDEVHAAGV PVAAVAAWQS LHHAGPITAG QRILIHGAAG GLGGYAVQYA KRAGAEVFAT
ASTAHLEYVR SLGADHVIDY RTEHFESVAQ DIDLVLDYVG GEVLDRSWQV LSKDGVIVGT
SSPDILARTP SGRRGLWFMN KPDTALLERL VAEIAEGTLI SKLGETVGFG DIPAAIERNR
TDPRIGKVVA DFSR
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