| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6203 |
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| Symbol | |
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| ID | 7975093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 934839 |
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| End bp | 935300 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796773 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_002948032 |
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| Protein GI | 239820847 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCAG CCCGACTCGA CTATCACGCC CTCGCGCCTG CGGCAGCGCG TGCCGGTACC
CAGTTTTCCC ACGTCGCCGG CAGTACGCTG GACAAGCGCC TGCGTGAATT GGTGAACTTG
CGCATCAGCC AGATCAACGG CTGCGCCTTC TGCATCGACA TGCACTGGGT CGACCTGCTC
AAGCAGGGCA TGGACCCGCG CCATGTCAAC GCCGTGGCCG GCTGGCGCGA GGCCGAGCGC
TTCTTCAGCG AAGCCGAGCG CGCCGCGTTC AACTGGGCCG AGGCCGTCAA CGCGGTGCCG
CATCGCACGC CCAGCGACGC GGACTTCGAG GCAGTGAAGC GGCACTTCAG CGACGCACAG
ATCGCGGACC TCTCGTTCGC GGTCTGCGCG ATCCGCTCGT GGAACATGCT CAATGCCAGC
TTCCACACGC AGGTGCCCGA AACGCCGTAC ACCGTCGGCT GA
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| Protein sequence | MSSARLDYHA LAPAAARAGT QFSHVAGSTL DKRLRELVNL RISQINGCAF CIDMHWVDLL
KQGMDPRHVN AVAGWREAER FFSEAERAAF NWAEAVNAVP HRTPSDADFE AVKRHFSDAQ
IADLSFAVCA IRSWNMLNAS FHTQVPETPY TVG
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