| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6189 |
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| Symbol | |
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| ID | 7975079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 922902 |
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| End bp | 923798 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796759 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002948018 |
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| Protein GI | 239820833 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.35302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACCG ATCAATCCAT TCCCTCGCAA ATTCTCGACC TCATCCAGGC AGACGCCATG
CCGGCTGGCA CTCATCTGCC GGCGCAGCTT CTGGCTGACC GACTGCGGGT GTCGCGCTCT
CCCGTGAACG AAGCGCTGTC GCTGCTGGCC GAGAAGGGCG TGCTCATGCG CCAGCCCAAT
CGGGGCTACT TTCTGGTGAA GCCCATCGAG AATGAGGCGA GGGCACTCGC CGGCGAGCTG
GGCCTCGAAG AATCCGACGT TGTGACCGAG GTGTACTTCC GCATCGCAGA CGATCGATTG
AGGGGGCTGC TGCCCGACGA GTTTCCTGAG GCGCTCCTGA AGCAACGCTA CGGCCTCACC
CCCGTGCAGC TGAATGGCGT GCTCAGTCGC ATTGCCAATG AAGGCTGGGC CGAGAAGAAG
CCGGGCTACG GCTGGGTGTT TTCGTCGATG CTGACCACCG CCGACAGCCT GCTGCAGTCG
TATCGGCTAC GCCTTGCGCT CGAGCCCGCC GCGCTGCTCG AGCCCAACTA CCACCTATCG
CCCCAGGTGA TCGCGCGCTG CCGCGCAGCG GAAAAGCATT TGCTCGAAGG CGGCATCGAA
ACCGACACCG CCGATCAGCT GCACGACCGC GGCGTGCGCT TCCACGAATC GCTGGTCGAG
GGCTCGGGCA ACGCGTTCTT CATCGACACC ATCCGGCGCG TCAACCGCGT GCGCCGGCTG
CTGTCGTACC GCTCGATGCA GGACCGCAGC CGCTACAAGG AACACTGCCA GCAGCACCTG
CACCTGCTCG ACCTGCTCGA GCGCGGCCGC AACGACGAAG CGTCGAAGGC CATGCACCAG
CACCTTTCCA GCACGCTGCG CAATCTCGCG AAGATCAGCA GCATCCTCAA GACCTAG
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| Protein sequence | MRTDQSIPSQ ILDLIQADAM PAGTHLPAQL LADRLRVSRS PVNEALSLLA EKGVLMRQPN
RGYFLVKPIE NEARALAGEL GLEESDVVTE VYFRIADDRL RGLLPDEFPE ALLKQRYGLT
PVQLNGVLSR IANEGWAEKK PGYGWVFSSM LTTADSLLQS YRLRLALEPA ALLEPNYHLS
PQVIARCRAA EKHLLEGGIE TDTADQLHDR GVRFHESLVE GSGNAFFIDT IRRVNRVRRL
LSYRSMQDRS RYKEHCQQHL HLLDLLERGR NDEASKAMHQ HLSSTLRNLA KISSILKT
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