| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6188 |
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| Symbol | acnA |
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| ID | 7975078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 920232 |
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| End bp | 922871 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796758 |
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| Product | aconitate hydratase |
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| Protein accession | YP_002948017 |
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| Protein GI | 239820832 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA CTGAGACGCC CTGCATGCGG TTTGTCGTGG CCGGGCAGGA CTACCTGGCC
GTCGATCTGC CGGCGCTCTG CAAAGACAAG CTCAGTCGCT TGCCCGTGGT CTTGCGCCTG
CTGATGGAAA ACGTCGCGCG CAACATGGAA GGCGCCGAGA AAGACGCCGC TCTGGCAGCG
CTTCTCGCGT GGACCGACAC CGGCACCAGC GAAGCGGAAA TCGCCTTCCA GCCCGGGCGC
GTGCTGATGC ACGACACGAC CAGCACGCCC GCGCTGGTGG ATCTGGCCGC CATGCGCAGC
ACGCTGTCGG AGGCCGGTGT CGATCCGTCG GTGCTGAACT CGAGCCTGCC GGTGGATGTG
TCGGTGGACC ACTCGCTGGC GGTCGAGGCC TTCGCGCGCA AGGACGCACC CGAGGAGAAC
ATGGCGATCG AGGTACGGCG CAACGCGGAG CGCTACGCAT TCCTGCGCTG GGCCTCGAAG
GTGCTGCGGG GCGTGCGCAT CAATCCGCCC GGCACAGGGA TCATGCACAC CATCAACCTG
GAACAGCTGG CCACCGTGGT GACGCTGCAA GAGCGTGATG GCTTGCGCTG GTTGGTGCCG
GACATGATGA TCGGCACCGA CAGCCATACG CCCATGGTCA ACGGCATCGG CGTGCTCGGC
TGGGGCGTGG GCGGACTCGA AGCCCAGACC GTGATGTTCG GCATGCCAAC CATGCTGCGT
ATTCCCGATG TGATCGGCGT GCGACTTACC GGTGCGCTGC GCCCGGGCGT GCTGGCGACC
GATCTGGCAC TCGTCGTTAC GCAGCGTCTG CGGGCTATCG GAGTCTCCGG CGAGTTCGTG
GAGTTCTACG GCCCCGGTGT ATCGACTTTG ACCGCAGGCG ACCGCTGCGT GGTGGCCAAC
ATGGCGCCGG AGTACGGCGC GACCACGGGC TTCTTTCCGG TCGACCGCCA CACGATCGAC
TACCTGCTGG AGACCGGCCG AACGCGGGCT CAAGTCGAAC GCGTGGAAAC GTACACCCGC
GCGGCCGGCT TGTGGTTCGA CCCTGCAGCG CTGCCGACCT ACACGCGCGG CCTCCACATC
GCGCTGGAGA CGGTCGACAT GCACATCGCG GGCCCGCGTC GCCCGCAAGA CCTGTTGGGG
TATGGCGATG CCGCCTCGGC CCTGGCCGCG CTCGCCTTCG AGCCGAAGGC TGTCGATACC
CAAATGCCCC GGCACCCGGT TGCCATTGCA GCCATCACGA GTTGCACCAA CACTTCCGAC
CCGCGCCTGC TGGTTGCCGC CGGCCTCGTC GCGCGCAGGG CGCGCGCGCT CGGCCTGAAG
GTGCCGCACT GGGTAAAGAC ATCGCTCGGT CCGGGCTCGC CCGCGGCAGC GGCCTACCTG
GAGCGCGCCG GCCTCACGAC CGACCTCTCG GCGGTCGGCT TCGACATCGT GGGCTACGGC
TGCACGACGT GCATCGGCAA CTCGGGTCAG CTGCCCAGGG TGATTCACGA CGCGATGGGC
AGAGGTGCGA TCCATCCGGT CGCGGCGCTG TCGGGCAACC GCAACTTTCC GGGACGGGTT
CACCCCGACC TCGACCTTGG CTTTCTGATG TCGCCGCCGC TGGTCATCGC TTTCGCGCTG
GCGGGAGACG CGGAGCGGGA CTTGCGCGTG GACCCTGTGC AGATCACCGC CAAGGGCAAA
CCGGTTTATC TGCGGGACCT GTGGCCTTCG GCCGAAGAGA TCGAAATTGC GCTCGCGCGT
TCGCAAGATC CGTCGGATTA CCCGCGCGCC TTTGCCATCG CCACCGGCAA CCCCCTGTGG
CATGCGCTCG CCGCACCGGA CACCGAGCTC TACCCCTGGA ACCGCGCCTC CACCGCGCTG
CGCCGCCCCC CGTTCGCCGC CTTGTCGGAA GGCAGCATGC TCGGCCGCTA CAGCGCGTAC
CCGCTCCTCG TGGTGGGCGA CGACATCACG ACCGACCACA TCTCGCCGGC CAGCGCGATT
CCCAAGGACA GCCTGGTGGC CGACTTCCTC GTGGCGCGCG GCGACGACCG CGACGACCTG
AACGTATTCG CCTCGCGGCG GGGCAACTGG GAGGTGATGG TGCGGGCAGC CTTCCACAGC
AAGACGCTGA AGAACCTCCT GGCGCCTGGC GCCCCTGTGG CACACACGCT GCACGTGCCC
ACCGGCGAGG TGGTGCCGCT CTGGGAGGCC GCGCAGCGCT ATCGCGCATC GGGCGATTCG
GTCGTGCTGG TCGCGGGCGA GCGATACGGC ACCGGCTCAT CGCGCGACTG GGCCGCCAAG
GGCCAGCGGC TGCTGGGTAT TCGCGCTGTG CTGGCCAACA GCTTCGAGCG CATTCATCGT
TCCAACCTGA TCGGTATGGG CGTGCTGCCA CTGCGCTTGC CTGCGGGCAT GACGCCTGTC
ACGCTCGGGC TGGCTCCGGG CGATTGCATC GAGGTCGATG CGCAGCCCGA AAATATCCGC
CCGCGCGGCC CTGTTGCCGT CACGCTGCGC CGCGCCGGTG GCCGCACGGA GTGCTTCGAT
GTGGTGGCGG CGGTCGAGAC GAAGCTGGAG GTCGAGCTTC TGCAGGCTGG TGGCGTCATT
CCGTCAACCC TGCAAAAAAT GATGAAGAAG CATGGCGCGG CAGCCCTGCC TGCCGCGTAG
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| Protein sequence | MENTETPCMR FVVAGQDYLA VDLPALCKDK LSRLPVVLRL LMENVARNME GAEKDAALAA
LLAWTDTGTS EAEIAFQPGR VLMHDTTSTP ALVDLAAMRS TLSEAGVDPS VLNSSLPVDV
SVDHSLAVEA FARKDAPEEN MAIEVRRNAE RYAFLRWASK VLRGVRINPP GTGIMHTINL
EQLATVVTLQ ERDGLRWLVP DMMIGTDSHT PMVNGIGVLG WGVGGLEAQT VMFGMPTMLR
IPDVIGVRLT GALRPGVLAT DLALVVTQRL RAIGVSGEFV EFYGPGVSTL TAGDRCVVAN
MAPEYGATTG FFPVDRHTID YLLETGRTRA QVERVETYTR AAGLWFDPAA LPTYTRGLHI
ALETVDMHIA GPRRPQDLLG YGDAASALAA LAFEPKAVDT QMPRHPVAIA AITSCTNTSD
PRLLVAAGLV ARRARALGLK VPHWVKTSLG PGSPAAAAYL ERAGLTTDLS AVGFDIVGYG
CTTCIGNSGQ LPRVIHDAMG RGAIHPVAAL SGNRNFPGRV HPDLDLGFLM SPPLVIAFAL
AGDAERDLRV DPVQITAKGK PVYLRDLWPS AEEIEIALAR SQDPSDYPRA FAIATGNPLW
HALAAPDTEL YPWNRASTAL RRPPFAALSE GSMLGRYSAY PLLVVGDDIT TDHISPASAI
PKDSLVADFL VARGDDRDDL NVFASRRGNW EVMVRAAFHS KTLKNLLAPG APVAHTLHVP
TGEVVPLWEA AQRYRASGDS VVLVAGERYG TGSSRDWAAK GQRLLGIRAV LANSFERIHR
SNLIGMGVLP LRLPAGMTPV TLGLAPGDCI EVDAQPENIR PRGPVAVTLR RAGGRTECFD
VVAAVETKLE VELLQAGGVI PSTLQKMMKK HGAAALPAA
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