| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6182 |
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| Symbol | |
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| ID | 7975072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 913890 |
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| End bp | 914795 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796752 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002948011 |
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| Protein GI | 239820826 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTTG AAGATCTGGA TGTCTTCCGA GCCGTTCACG AGACCGGCAA TTTTCAGCGG
GCCGCACTTC GCTGCGGCCT GAGCCAGTCG GCCGTCACCA AGGTCGTGCG CAAGCTCGAA
GACGAGTTCG GTGTCCAGCT GATGGAGCGC GGCGGGCGTT CGCTCGCACT GACGCCGGCC
GGCCGGACCC TGTACCTGCG GGCCATGGAG CTCAGCGCGC TCACGATTGC GACGCGGCGC
GACATGGCCG GCGAAGTGGC CGCGATGCGC GGGGCGATCC GGCTGGGCAT CGTGCCGGCA
CTGCTCGGCA GCGTGGCCGC GCCGGTGCTG GCCGACATGC TCCCGGGACC GCACCCGGTC
CAGTTGCTGG TGAGCGTCAA GCATTCGGCA GAGCTGGTGC GCATGCTCGA AGAAGGCAAG
CTCGATTTGG CCGTGTGCTT CGGCGTGCAG CACCTCCCGC CCGACGTTCT GCGCACGCGG
GTCGGACCCC AGCGCTACAG GCTCGTGGTT CGCGCCGGGC ATCCGCTTGC AGGAAGCATC
CCGAGCCTGG AGCAGCTGTC GAAATCGCGC TGGCTGCTTC CGACTTCCGA TGTGACGCTC
AGGACCGAGG TCGAACAGAT GTTCGCCAAT GCGGGCCTCG GTGCGCTGGA CGTGCGCGTC
GAGACCGACA CCTCGGCCAC GCTCATGATT CCGCTGCTGC GGCGAAGCGA CCTGATCACG
GTGCTTCCCG AGCAAGCGTT CCAGCCGCTC GCAGGCGAAG GTTTGGCGGC GCTGGACGTC
GACCTGCATG CGCTGACGGG CGAAGTCACG GTCTATCACC GACGCAAGAC GCCCTCCGTG
GGACTGCTGA TGGAACTGAA GCACCGGCTC GAGGCGCAGG CCCGCAGCAA CTCCCTGTCT
GGCTAG
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| Protein sequence | MRLEDLDVFR AVHETGNFQR AALRCGLSQS AVTKVVRKLE DEFGVQLMER GGRSLALTPA
GRTLYLRAME LSALTIATRR DMAGEVAAMR GAIRLGIVPA LLGSVAAPVL ADMLPGPHPV
QLLVSVKHSA ELVRMLEEGK LDLAVCFGVQ HLPPDVLRTR VGPQRYRLVV RAGHPLAGSI
PSLEQLSKSR WLLPTSDVTL RTEVEQMFAN AGLGALDVRV ETDTSATLMI PLLRRSDLIT
VLPEQAFQPL AGEGLAALDV DLHALTGEVT VYHRRKTPSV GLLMELKHRL EAQARSNSLS
G
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