Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6103 |
Symbol | |
ID | 7975549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 818966 |
End bp | 820063 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644796659 |
Product | histidine kinase |
Protein accession | YP_002947933 |
Protein GI | 239820748 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGAGT CTGCAACACT GCCGCGCCCC GGCGCGCAAG CGCTTTCCTC GAAGGACGAG ATCGCACGGC TCAACAAGAT CGTCCAGGCC CTGATGGACC GGGCCGAGCG CAGCGCCAAC GCACAGGGCT CGGACTTCAA CCTCTTCCAG ACCACCATCA TGCTGGAGGA GCAGGTGCTC AGCCGCACCG CGGAACTGGA AGCGGCGCTG CGCGAGAACG AAGAGGTCAA CCGCGTGCTG CGCAAGACGC AGGCCGACCT GGTGGCCGCA GCGCGCTCGG CCGGCATGGC CGAGATCGCC ACCAACGTGC TGCACAACGT GGGCAACGTG CTCAACAGCG TCAACGTGTC CGCGGGGCTG ATTCTTTCCA GGGTTCGCGC GTCCAAGGTG GAAGGACTCG CGCGCGCGGT GCAATTGATG AACGCGCATG CGGACGACCT GGGCACCTTC CTCGCGTCCG ACGCCAAGGG CAAGCTGCTC CCGGGCTACC TGATGCAGCT GGCGCCGCTC CTGGTGGCGG AGCAGCGCAC CGTCGTCGAC GAGCTGGTGG CGCTGGGCAA GAGCGTCGAC CACATCAAGG AAATCATCGC CGCGCAGCAG GCCCATGCCC GCGCCTCCAG CCTGATCGAG CCGATACGCG TCCACGAACT CGTCGAGGAC GCGCTGCGCA TGAACGCGTC GGGCGCGGCG CGCTACCAGG TGGTGATCGG GAGCGGCCTC GTCCGCCTTC CCGAACTGCC GCTGGACCGG GGCCGCCTGC TGCAGGTGCT GATGAACCTC GTGCGCAATG CCAGGCAGGC GATGGAAGCG GTGGCGGACG ACCGCGCCAA GCTCATGCTC GATGCGGAGA TCGTCGGGGA CGAGGTGCTG CGCATCCGCG TGGCAGACAC GGGCGTCGGC ATCGCCCCCG ACAACCTCAC GCGCGTGTTC ATGCACGGGT TCACCACCAG GAAGGACGGC CACGGCTTCG GCCTGCACAG CGCAGCCATC GCGGCGCGCG AGATGGGCGG CACGCTGGCA GTCCACAGCG ACGGACCCGG CACCGGCGCC ACCTTCACGC TCGAACTTCC GATCAGAAAG GCCGCAGAGA CGCCATGA
|
Protein sequence | MRESATLPRP GAQALSSKDE IARLNKIVQA LMDRAERSAN AQGSDFNLFQ TTIMLEEQVL SRTAELEAAL RENEEVNRVL RKTQADLVAA ARSAGMAEIA TNVLHNVGNV LNSVNVSAGL ILSRVRASKV EGLARAVQLM NAHADDLGTF LASDAKGKLL PGYLMQLAPL LVAEQRTVVD ELVALGKSVD HIKEIIAAQQ AHARASSLIE PIRVHELVED ALRMNASGAA RYQVVIGSGL VRLPELPLDR GRLLQVLMNL VRNARQAMEA VADDRAKLML DAEIVGDEVL RIRVADTGVG IAPDNLTRVF MHGFTTRKDG HGFGLHSAAI AAREMGGTLA VHSDGPGTGA TFTLELPIRK AAETP
|
| |